Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997419
Identifier: 39997419
GI number: 39997419
Start: 2540614
End: 2540961
Strand: Direct
Name: 39997419
Synonym: GSU2321
Alternate gene names: NA
Gene position: 2540614-2540961 (Clockwise)
Preceding gene: 39997418
Following gene: 39997420
Centisome position: 66.61
GC content: 62.36
Gene sequence:
>348_bases ATGAAGGCCCTCCTGACCACCATATGCCTTATTGTGCTGGCCGTCATGCTCTTCGTGACCGTCACCGCCTCCATCCACGA GGACGTGGTCACCGCCGCCCGCCTCCTCTTACCGGATCCCTGGTTCCGCGCAACCCTGGCCGATGCCTACTTCGGATTTC TCTTTTTCTGGCTCTGGGTGGCTTGGCGGGAGCGAAGCGCGGGGCGGGCGGGGCTCTGGTTCATCCTTATCATGACCCTG GGAAATTTCGCCATGGCCGGCTATCTGCTCTGGCACCTGCGCCGATGGGAACCGGCGGACGGTATCGGGAAGCTCCTCAT GGGAGAGAGGCATGGAAACGGCCGTTGA
Upstream 100 bases:
>100_bases ATCGAAGGGGCCGATTTCGCGGCAGCCTACTTCGGCATCTGGCTGGGCCGAAGGCCCATCGACGACACGCTGAAGAATGA TCTCCTGGGGAGCGGCTGAG
Downstream 100 bases:
>100_bases GGTGCGGGCCCCGGCTGCGGCCGCCTGGGAACTGCTTACCGATACTCGGCGCTGGAGCGAGTGGGGGCCATCGGTCTCCG GGGTTGAGTGCCCGGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKALLTTICLIVLAVMLFVTVTASIHEDVVTAARLLLPDPWFRATLADAYFGFLFFWLWVAWRERSAGRAGLWFILIMTL GNFAMAGYLLWHLRRWEPADGIGKLLMGERHGNGR
Sequences:
>Translated_115_residues MKALLTTICLIVLAVMLFVTVTASIHEDVVTAARLLLPDPWFRATLADAYFGFLFFWLWVAWRERSAGRAGLWFILIMTL GNFAMAGYLLWHLRRWEPADGIGKLLMGERHGNGR >Mature_115_residues MKALLTTICLIVLAVMLFVTVTASIHEDVVTAARLLLPDPWFRATLADAYFGFLFFWLWVAWRERSAGRAGLWFILIMTL GNFAMAGYLLWHLRRWEPADGIGKLLMGERHGNGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13125; Mature: 13125
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLTTICLIVLAVMLFVTVTASIHEDVVTAARLLLPDPWFRATLADAYFGFLFFWLWV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AWRERSAGRAGLWFILIMTLGNFAMAGYLLWHLRRWEPADGIGKLLMGERHGNGR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MKALLTTICLIVLAVMLFVTVTASIHEDVVTAARLLLPDPWFRATLADAYFGFLFFWLWV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AWRERSAGRAGLWFILIMTLGNFAMAGYLLWHLRRWEPADGIGKLLMGERHGNGR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA