Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997399
Identifier: 39997399
GI number: 39997399
Start: 2519990
End: 2520394
Strand: Direct
Name: 39997399
Synonym: GSU2301
Alternate gene names: NA
Gene position: 2519990-2520394 (Clockwise)
Preceding gene: 39997398
Following gene: 39997400
Centisome position: 66.07
GC content: 57.78
Gene sequence:
>405_bases TTGTTCTTGACAAAAATTATCATAATGTTGTACAAGATTATCTGTATGCGTACCGTGAGTATTTTCCATACCTGCCTTGC GGCAGTTCTGGCGACTGTCATTTTCATCTTCTCCACCGTCGGGTTCGGCGTGGCATGCCAACTGGTCGTCCCCAAGGTGG TCGACTCGTCCCACCATTACCACACTGACCGGCTCTGCCCCGCCGACAGCGAACGGAACGACGGCAGCTCGACTCCGGCA TCCGAATGCCCCTTGGCCCACGGAGACCTGCCCCCCTGCTGCGCGGATGAGACGATCCTTCCGGCCTATTGTCCGTCCTT CGCCCTGCTCGATGTTCACGACCCCCTGAGAGCACCGCCCCAGGTCTACCTTGACTGGTTTGTCCCGCCCCAGAATCAGA CCTGA
Upstream 100 bases:
>100_bases CATTACCCTGCCAAAACATCACTACCAGAGGCCTTTCCAGTGCTAAGCGGCCGACCAATTAGCGAAGTTATTTAAACGGC TTCAGCGGCATCGAGCGCCC
Downstream 100 bases:
>100_bases AGCGAATCAGCCTTTGGTGCCGTAACGTTCAGACCGGCCATGGGTCCATCGGGCCTGGTCAGATCAAGGCGGCACCAGCC GCCGGTATGTCGCCGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFLTKIIIMLYKIICMRTVSIFHTCLAAVLATVIFIFSTVGFGVACQLVVPKVVDSSHHYHTDRLCPADSERNDGSSTPA SECPLAHGDLPPCCADETILPAYCPSFALLDVHDPLRAPPQVYLDWFVPPQNQT
Sequences:
>Translated_134_residues MFLTKIIIMLYKIICMRTVSIFHTCLAAVLATVIFIFSTVGFGVACQLVVPKVVDSSHHYHTDRLCPADSERNDGSSTPA SECPLAHGDLPPCCADETILPAYCPSFALLDVHDPLRAPPQVYLDWFVPPQNQT >Mature_134_residues MFLTKIIIMLYKIICMRTVSIFHTCLAAVLATVIFIFSTVGFGVACQLVVPKVVDSSHHYHTDRLCPADSERNDGSSTPA SECPLAHGDLPPCCADETILPAYCPSFALLDVHDPLRAPPQVYLDWFVPPQNQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14747; Mature: 14747
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLTKIIIMLYKIICMRTVSIFHTCLAAVLATVIFIFSTVGFGVACQLVVPKVVDSSHHY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HTDRLCPADSERNDGSSTPASECPLAHGDLPPCCADETILPAYCPSFALLDVHDPLRAPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCC QVYLDWFVPPQNQT EEEEEEECCCCCCC >Mature Secondary Structure MFLTKIIIMLYKIICMRTVSIFHTCLAAVLATVIFIFSTVGFGVACQLVVPKVVDSSHHY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HTDRLCPADSERNDGSSTPASECPLAHGDLPPCCADETILPAYCPSFALLDVHDPLRAPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCC QVYLDWFVPPQNQT EEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA