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The map label for this gene is prfB

Identifier: 39997376

GI number: 39997376

Start: 2494365

End: 2495414

Strand: Direct

Name: prfB

Synonym: GSU2278

Alternate gene names: NA

Gene position: 2494365-2495414 (Clockwise)

Preceding gene: 39997371

Following gene: 39997384

Centisome position: 65.4

GC content: 61.52

Gene sequence:

>1120_bases
ATGTTCAGAGAAGAAGTTGCACGGGTCGAAAATTTCGGGGAGCGGATTGCCAAGCTCCGGGGGTCTCTTTGACATAGACA
GCAAGCGGGAAGACATCCAGGAACTGGAAGCGCAGATCGCCGCTCCCGGCTTCTGGGACAATAACGAGGAAGCCCAGAAG
GTCCTGCGGGAGAGAACCCGCATCGAAAAACTCATAGACCTGTGGGATCGCCTCAACCGCCAGGCGGACGACATCCGCGT
CCTCATCGAATTGGGAGAGGAAGCCCAGGACGAGGCCACACTCGACGAAGTCCGCGCCCTCAACGACAGCCTTGAGCGCG
AAGTGGAAGGGGCCGAATTCCAGCGCATGTTGTCGGGCCCCCACGACAAGAACAGCTGTTTCGTTTCCATCAATGCCGGC
GCCGGCGGAACCGAGGCCCAGGACTGGGCCGAGATGCTGCTCAGGATGTACCTGCGCTACTGCGAGCGCAAGGGCTGGAA
GACCGAAATCACCGACTTCCAGGCGGGAGACGAGGCCGGGGTGAAGTCGGCGACCTTTACGGTTGACGGTGAGTACGCAT
ACGGCTATCTTAAGGCCGAGGCCGGGATTCACCGCCTCGTGCGGATTTCCCCCTTCGACAGCAACGCCCGCCGGCATACC
TCCTTTGCCTCGGTGTTCGTCTTCCCCGAAATCGAGGACGACATCGAGATCAAGATTGCCGAGTCGGATCTGCGGGTCGA
TACCTACCGTTCCAGTGGCGCCGGCGGTCAACACGTAAACACCACCGACTCCGCCGTCCGGCTTACTCACCTTCCCACGG
GCATCGTGGTCGCCTGCCAGTGCGAGCGAAGCCAGCACCTGAACAAAGCCACGGCGCTGCGGATGCTCCGGGCGAAACTC
TACGAAAAGGAGCTCCAGGAGCGCGAAGTCCAGGCCTCCGAACTGGCCGGCGAGAAAAAGGATATCGGCTGGGGAAGCCA
GATCCGCTCCTATGTGCTCCACCCCTATAAGATGGTCAAGGATCTGCGGACCGGCGTCGAATCGGGCAACCCCGACGCGG
TCCTGGACGGTGCACTGGAGGATTTCGTTGTAGCGTTCCTCATGGGGGTGCGGCGCGATGTGAAAGACTCCGACGAGTAA

Upstream 100 bases:

>100_bases
CGGTAGCGCCTGACGGGATATCCCGGACATTTTCCGGCGCCGTGTGCCGTCCCGCACCGGCGTCGCACTTATTTATTTGA
GTCACAACAAGGAGTTGACG

Downstream 100 bases:

>100_bases
GGTGCGATGGCAAAAAAACTAACACTTTTCCTCGTGTTTGTCGCAGTGGCCTTCGTGACGGCCACGGGCTGCGCCACGCC
CCGGGCGGGTCTCTCCCGCG

Product: peptide chain release factor 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>372_residues
MFREEVARVENFGERIAKLRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNRQADDIRV
LIELGEEAQDEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAGAGGTEAQDWAEMLLRMYLRYCERKGWK
TEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVD
TYRSSGAGGQHVNTTDSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDIGWGSQ
IRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFLMGVRRDVKDSDE

Sequences:

>Translated_350_residues
LLVGVFHIAPHPHEERYNEILQCTVQDRVGVARFDAGPQILDHLIGVEHIGADLASPADILFLAGQFGGLDFALLELLFV
EFRPEHPQRRGFVQVLASLALAGDHDARGKVSKPDGGVGGVYVLTAGATGTVGIDPQIRLGNLDLDVVLDFGEDEHRGKG
GMPAGVAVEGGNPHEAVNPGLGLKIAVCVLTVNRKGRRLHPGLVSRLEVGDFGLPALALAVAQVHPEQHLGPVLGLGSAG
AGIDGNETAVLVVGARQHALEFGPFHFALKAVVEGADFVECGLVLGFLSQFDEDADVVRLAVEAIPQVYEFFDAGSLPQD
LLGFLVIVPEAGSGDLRFQFLDVFPLAVYV
>Mature_350_residues
LLVGVFHIAPHPHEERYNEILQCTVQDRVGVARFDAGPQILDHLIGVEHIGADLASPADILFLAGQFGGLDFALLELLFV
EFRPEHPQRRGFVQVLASLALAGDHDARGKVSKPDGGVGGVYVLTAGATGTVGIDPQIRLGNLDLDVVLDFGEDEHRGKG
GMPAGVAVEGGNPHEAVNPGLGLKIAVCVLTVNRKGRRLHPGLVSRLEVGDFGLPALALAVAQVHPEQHLGPVLGLGSAG
AGIDGNETAVLVVGARQHALEFGPFHFALKAVVEGADFVECGLVLGFLSQFDEDADVVRLAVEAIPQVYEFFDAGSLPQD
LLGFLVIVPEAGSGDLRFQFLDVFPLAVYV

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36915; Mature: 36915

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LLVGVFHIAPHPHEERYNEILQCTVQDRVGVARFDAGPQILDHLIGVEHIGADLASPADI
CEEEEEECCCCCCHHHHHHHHEEHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEE
LFLAGQFGGLDFALLELLFVEFRPEHPQRRGFVQVLASLALAGDHDARGKVSKPDGGVGG
EEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VYVLTAGATGTVGIDPQIRLGNLDLDVVLDFGEDEHRGKGGMPAGVAVEGGNPHEAVNPG
EEEEEECCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHCCCC
LGLKIAVCVLTVNRKGRRLHPGLVSRLEVGDFGLPALALAVAQVHPEQHLGPVLGLGSAG
CCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCEEECCCCC
AGIDGNETAVLVVGARQHALEFGPFHFALKAVVEGADFVECGLVLGFLSQFDEDADVVRL
CCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHH
AVEAIPQVYEFFDAGSLPQDLLGFLVIVPEAGSGDLRFQFLDVFPLAVYV
HHHHHHHHHHHHCCCCCHHHHHCEEEEEECCCCCCEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA