Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997252
Identifier: 39997252
GI number: 39997252
Start: 2370002
End: 2370976
Strand: Direct
Name: 39997252
Synonym: GSU2154
Alternate gene names: NA
Gene position: 2370002-2370976 (Clockwise)
Preceding gene: 39997251
Following gene: 39997253
Centisome position: 62.14
GC content: 54.15
Gene sequence:
>975_bases ATGAGCAAACTCGCTGCATTTCTGGGACGGGCTATTCCGACCCATCAGCAGAAACAATCCTCACACCTCGGTGACCGAAC CTTGTACGTCGGAGCATCCGATATTGCCGGCTGTCCACGCAAAGCGGCACTCGGCAAACAAAACCCGACCGGTCACGACA TCAAAACACTCCTTCGTTTTTCCCGTGGCCACGCCGCGCAAGCCATGTATGCCGATTTCTTCAGGACCGGTGGCGCTCTC TTCGAAGAAGAAGTCGAAGTGCGGCATCCGGCTATACCTGAGATCAGGTGTCACATCGACTTCCTGTTCTATGCAAACCG GCAGACCAAACGGCTGCACATCGTGGAGATGAAGTCGACCGACGGCATCCCCGACGAACCCTACGCATCATGGGTGGATC AACTGCATGTCCAGATGGGCCTGCTGCAACTCACCCTTGATCCGGCAGTGGAAATCGGTGGTTCGATCCTGGTGGTGGAC CTCAATGCGGGATCGTACCATGAGTTCAACAGCTATACACCCAACAGACTGGTATTCGACCAGCTTGTGGAAAAGGGAAA GCATATCCTTGCAGCAGCGCGAGGCGAGTGCGCTCCCCGAACCGAACCAGGTATTCTCTGCGGTTACTGTCCGTTTCGCA CCGGCTGTCCTTCCCATGCCGTCGCCCTGGATCTCCCCCGGGAGATACTTGATACCGGCAGGAAGTATCTGGAGCTGAAT GAACAAAAGAAGGCTCTCGAAAACCGACTGGACGTCCTGAAGAACGACATTCTCACCTTTGCGGATGGCACGTTCAAAGG GGCTTCGGACGGAATACTGATCAATGTCACCTCAGTGGCTGATTCGACAACCATCGACAGCTACAAGCTCAAGAGAAACT ATCCAGATATATACGATCAGGTAACGAAACCGAAGTCAGGTTACGTCAAACTTGAAATCAAGCCATTCACGCCGCTCGCA GCTCAAGCGGCTTGA
Upstream 100 bases:
>100_bases ATCAGCATCGATGTCACCAGGATCATTGCCGGCGTTATTTTCGGTTCCCTGCTCACCGCAGTTGGAACCTTACCGTTTCT GATCTGAAAAGGAGACAGCC
Downstream 100 bases:
>100_bases ACCAACCCCACCAGGGGGCATCACGCTCCCCATGGGAACTCTCCATTCATGGAGGCGTGCGCCCCCATTGAAAGGAGATT ATCGATGAAAATCTATCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSKLAAFLGRAIPTHQQKQSSHLGDRTLYVGASDIAGCPRKAALGKQNPTGHDIKTLLRFSRGHAAQAMYADFFRTGGAL FEEEVEVRHPAIPEIRCHIDFLFYANRQTKRLHIVEMKSTDGIPDEPYASWVDQLHVQMGLLQLTLDPAVEIGGSILVVD LNAGSYHEFNSYTPNRLVFDQLVEKGKHILAAARGECAPRTEPGILCGYCPFRTGCPSHAVALDLPREILDTGRKYLELN EQKKALENRLDVLKNDILTFADGTFKGASDGILINVTSVADSTTIDSYKLKRNYPDIYDQVTKPKSGYVKLEIKPFTPLA AQAA
Sequences:
>Translated_324_residues MSKLAAFLGRAIPTHQQKQSSHLGDRTLYVGASDIAGCPRKAALGKQNPTGHDIKTLLRFSRGHAAQAMYADFFRTGGAL FEEEVEVRHPAIPEIRCHIDFLFYANRQTKRLHIVEMKSTDGIPDEPYASWVDQLHVQMGLLQLTLDPAVEIGGSILVVD LNAGSYHEFNSYTPNRLVFDQLVEKGKHILAAARGECAPRTEPGILCGYCPFRTGCPSHAVALDLPREILDTGRKYLELN EQKKALENRLDVLKNDILTFADGTFKGASDGILINVTSVADSTTIDSYKLKRNYPDIYDQVTKPKSGYVKLEIKPFTPLA AQAA >Mature_323_residues SKLAAFLGRAIPTHQQKQSSHLGDRTLYVGASDIAGCPRKAALGKQNPTGHDIKTLLRFSRGHAAQAMYADFFRTGGALF EEEVEVRHPAIPEIRCHIDFLFYANRQTKRLHIVEMKSTDGIPDEPYASWVDQLHVQMGLLQLTLDPAVEIGGSILVVDL NAGSYHEFNSYTPNRLVFDQLVEKGKHILAAARGECAPRTEPGILCGYCPFRTGCPSHAVALDLPREILDTGRKYLELNE QKKALENRLDVLKNDILTFADGTFKGASDGILINVTSVADSTTIDSYKLKRNYPDIYDQVTKPKSGYVKLEIKPFTPLAA QAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35839; Mature: 35708
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLAAFLGRAIPTHQQKQSSHLGDRTLYVGASDIAGCPRKAALGKQNPTGHDIKTLLRF CHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECHHHCCCCCHHHCCCCCCCCHHHHHHHHH SRGHAAQAMYADFFRTGGALFEEEVEVRHPAIPEIRCHIDFLFYANRQTKRLHIVEMKST HCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCC DGIPDEPYASWVDQLHVQMGLLQLTLDPAVEIGGSILVVDLNAGSYHEFNSYTPNRLVFD CCCCCCHHHHHHHHHHHHHHHHEEEECHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHH QLVEKGKHILAAARGECAPRTEPGILCGYCPFRTGCPSHAVALDLPREILDTGRKYLELN HHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCHHHHHCCHHHEECC EQKKALENRLDVLKNDILTFADGTFKGASDGILINVTSVADSTTIDSYKLKRNYPDIYDQ HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHH VTKPKSGYVKLEIKPFTPLAAQAA HCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure SKLAAFLGRAIPTHQQKQSSHLGDRTLYVGASDIAGCPRKAALGKQNPTGHDIKTLLRF HHHHHHHHHCCCCHHHHHHHCCCCEEEEEECHHHCCCCCHHHCCCCCCCCHHHHHHHHH SRGHAAQAMYADFFRTGGALFEEEVEVRHPAIPEIRCHIDFLFYANRQTKRLHIVEMKST HCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCC DGIPDEPYASWVDQLHVQMGLLQLTLDPAVEIGGSILVVDLNAGSYHEFNSYTPNRLVFD CCCCCCHHHHHHHHHHHHHHHHEEEECHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHH QLVEKGKHILAAARGECAPRTEPGILCGYCPFRTGCPSHAVALDLPREILDTGRKYLELN HHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCHHHHHCCHHHEECC EQKKALENRLDVLKNDILTFADGTFKGASDGILINVTSVADSTTIDSYKLKRNYPDIYDQ HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHH VTKPKSGYVKLEIKPFTPLAAQAA HCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA