Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39997240
Identifier: 39997240
GI number: 39997240
Start: 2359985
End: 2360257
Strand: Direct
Name: 39997240
Synonym: GSU2142
Alternate gene names: NA
Gene position: 2359985-2360257 (Clockwise)
Preceding gene: 39997238
Following gene: 39997248
Centisome position: 61.87
GC content: 51.65
Gene sequence:
>273_bases ATGATCTTCATCAACTGTCTGGCCAGCGATGGCTCTGACTATAATAGGGTATCTTCCGACAAGATTCGGAGCAATATCAA GAGTGTATGTGCCACCCTGTCCGGAAATGGCTTTCGGTTCACCTGGCTCCCACTGATAATTGCCATTCATATCCATGAAT ACTTCTGCTCCACGCAGATAACCGTCTGCTACGACACCGCTGACGGTGCTCACGCCATTTCCGCCACCACCACCGCCACC ACAACCTGCCAAGACACCCATCAACACCACTGA
Upstream 100 bases:
>100_bases CCGCTAGTTTCTGTTGAATCAGCGTTGACATGGGGCTAATGAAGTCGGTATATCCGGCAGGTGCTGTCAGGACGTAACCA TTGGCAAGCGGAGATGAAGG
Downstream 100 bases:
>100_bases AGCAAAACCTAAACTCATAACTTTGTTCATCTCGTCACTCCTTATTGTACTGCTATTGTACTGAACGGATACGTCCGCTT CTCTTATGAATAATTACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MIFINCLASDGSDYNRVSSDKIRSNIKSVCATLSGNGFRFTWLPLIIAIHIHEYFCSTQITVCYDTADGAHAISATTTAT TTCQDTHQHH
Sequences:
>Translated_90_residues MIFINCLASDGSDYNRVSSDKIRSNIKSVCATLSGNGFRFTWLPLIIAIHIHEYFCSTQITVCYDTADGAHAISATTTAT TTCQDTHQHH >Mature_90_residues MIFINCLASDGSDYNRVSSDKIRSNIKSVCATLSGNGFRFTWLPLIIAIHIHEYFCSTQITVCYDTADGAHAISATTTAT TTCQDTHQHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9910; Mature: 9910
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFINCLASDGSDYNRVSSDKIRSNIKSVCATLSGNGFRFTWLPLIIAIHIHEYFCSTQI CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCEE TVCYDTADGAHAISATTTATTTCQDTHQHH EEEEECCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIFINCLASDGSDYNRVSSDKIRSNIKSVCATLSGNGFRFTWLPLIIAIHIHEYFCSTQI CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCEE TVCYDTADGAHAISATTTATTTCQDTHQHH EEEEECCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA