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The map label for this gene is 39997211

Identifier: 39997211

GI number: 39997211

Start: 2332015

End: 2332446

Strand: Direct

Name: 39997211

Synonym: GSU2113

Alternate gene names: NA

Gene position: 2332015-2332446 (Clockwise)

Preceding gene: 39997209

Following gene: 39997214

Centisome position: 61.14

GC content: 56.02

Gene sequence:

>432_bases
TTGAACCTCAGCGTGGTTCTTGCTATACAACAGGGCATGAACGAAACAGCACAGCCGGAAAAACGCAAACGGGGAGAAGT
CGTCGACGCTGCCGTCTTTGTCGAAAGGCTCAAGAGCTTGATGGCTGACAAAGGACTCTCGTCGGCAGAACTCGCCGACC
GCGCCGATCTAGCCAGGTCGGCCCTAACTCAGTTTTTCGGAGGTGAGCGAAAGCCGAGTGCCGACGCCCTCGTAAAGTTG
GCGAACGTCTTGGACTCTTCGACCGACTATCTCTTGGGTCGTCGAGACAGCACTGATGTCGCGGCTCTCCTCCAAAACGA
CAAGATCATGGAGCTTATAAGCCTCTTCAGCGAGCTTTCAGTAGCCGACCAGGAGCGCGTTCTCGAGATGATCCGCCTGA
TGAAGGGAACCGCCGGGGCATCTCAAGAGTAG

Upstream 100 bases:

>100_bases
CCCAGGCCTTTCTTGAGGCCTCAGCCTGATTCATTTAAGTGAATTATACCATTCACTTTTATAAAAGTAAACAACAAAAT
TCACAGTTATGAATTAAAAC

Downstream 100 bases:

>100_bases
ACCTGTCAGGAACCGTTACTCGGCGAGCGCTTCTGCTGCGCTTGCCTACCGCTCCCTCGTTTCAATACCCTGGAAGTGTT
TCATCTGGTTGCCCGACAAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNLSVVLAIQQGMNETAQPEKRKRGEVVDAAVFVERLKSLMADKGLSSAELADRADLARSALTQFFGGERKPSADALVKL
ANVLDSSTDYLLGRRDSTDVAALLQNDKIMELISLFSELSVADQERVLEMIRLMKGTAGASQE

Sequences:

>Translated_143_residues
MNLSVVLAIQQGMNETAQPEKRKRGEVVDAAVFVERLKSLMADKGLSSAELADRADLARSALTQFFGGERKPSADALVKL
ANVLDSSTDYLLGRRDSTDVAALLQNDKIMELISLFSELSVADQERVLEMIRLMKGTAGASQE
>Mature_143_residues
MNLSVVLAIQQGMNETAQPEKRKRGEVVDAAVFVERLKSLMADKGLSSAELADRADLARSALTQFFGGERKPSADALVKL
ANVLDSSTDYLLGRRDSTDVAALLQNDKIMELISLFSELSVADQERVLEMIRLMKGTAGASQE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15558; Mature: 15558

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSVVLAIQQGMNETAQPEKRKRGEVVDAAVFVERLKSLMADKGLSSAELADRADLARS
CCCCEEEHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALTQFFGGERKPSADALVKLANVLDSSTDYLLGRRDSTDVAALLQNDKIMELISLFSELS
HHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHC
VADQERVLEMIRLMKGTAGASQE
CCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNLSVVLAIQQGMNETAQPEKRKRGEVVDAAVFVERLKSLMADKGLSSAELADRADLARS
CCCCEEEHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALTQFFGGERKPSADALVKLANVLDSSTDYLLGRRDSTDVAALLQNDKIMELISLFSELS
HHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHC
VADQERVLEMIRLMKGTAGASQE
CCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA