Click here to switch to the map view.

The map label for this gene is nudF [H]

Identifier: 39997113

GI number: 39997113

Start: 2208031

End: 2208483

Strand: Direct

Name: nudF [H]

Synonym: GSU2015

Alternate gene names: 39997113

Gene position: 2208031-2208483 (Clockwise)

Preceding gene: 39997112

Following gene: 39997138

Centisome position: 57.89

GC content: 60.49

Gene sequence:

>453_bases
ATGCCCTTCGAGTATCTCTCCTGTCCCCGTTGCGGGGAAAAAGTCCGTGCGTACCGCAATCCCGTCCCCACGGTCGACAT
TATCATCGAAACGCCGGACGGCATTGTTCTCATTGAACGAAAAAACGAACCGTTGGGATGGGCGCTGCCGGGGGGATTCG
TGGATTACGGCGAGTCCCTTGAGGACGCGGCCGTCCGCGAGGCATGGGAAGAAACCTCTCTCCGTGTGGCAGGGCTCAGG
CTCCTGGGGTGTTATTCCGACCCCCGGCGCGACGCACGTCAGCACACCATATCAACCGTTTTCATCGCCACCGCACAGGG
CACGCCCCGGGCGGGCGACGACGCGGCCGGGCTCGCCGTTTTTCCATCAAACAAACTCCCAGCCACGCTCTGTTTCGATC
ATCGAAAAATCCTCGACGACTACCTGCTCGTTACGGGGCTGAGTTCAGACTGA

Upstream 100 bases:

>100_bases
AGAAGGCCTCCGGCGGCAAGAAGAAGTAAGCCGGCCGGCCGCAACAAGACCGAGGGGGGAGGAAGCGATTCCTCCCCTTT
TCATTTCCCCGGAGGACGCC

Downstream 100 bases:

>100_bases
CAGGCGCCACCAAGGTGGTCCTGCCCCGAAGAAAATCGGCCACATCCTCCGAAGGCATGGGCGTACTGAACAAAAACCCC
TGAACCTCATCGCACTTGTT

Product: mutT/nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPFEYLSCPRCGEKVRAYRNPVPTVDIIIETPDGIVLIERKNEPLGWALPGGFVDYGESLEDAAVREAWEETSLRVAGLR
LLGCYSDPRRDARQHTISTVFIATAQGTPRAGDDAAGLAVFPSNKLPATLCFDHRKILDDYLLVTGLSSD

Sequences:

>Translated_150_residues
MPFEYLSCPRCGEKVRAYRNPVPTVDIIIETPDGIVLIERKNEPLGWALPGGFVDYGESLEDAAVREAWEETSLRVAGLR
LLGCYSDPRRDARQHTISTVFIATAQGTPRAGDDAAGLAVFPSNKLPATLCFDHRKILDDYLLVTGLSSD
>Mature_149_residues
PFEYLSCPRCGEKVRAYRNPVPTVDIIIETPDGIVLIERKNEPLGWALPGGFVDYGESLEDAAVREAWEETSLRVAGLRL
LGCYSDPRRDARQHTISTVFIATAQGTPRAGDDAAGLAVFPSNKLPATLCFDHRKILDDYLLVTGLSSD

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 16480; Mature: 16349

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFEYLSCPRCGEKVRAYRNPVPTVDIIIETPDGIVLIERKNEPLGWALPGGFVDYGESL
CCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCEECCCCHHHCCCCH
EDAAVREAWEETSLRVAGLRLLGCYSDPRRDARQHTISTVFIATAQGTPRAGDDAAGLAV
HHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHEEEEEEEEECCCCCCCCCCCCCEEE
FPSNKLPATLCFDHRKILDDYLLVTGLSSD
ECCCCCCEEEEHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
PFEYLSCPRCGEKVRAYRNPVPTVDIIIETPDGIVLIERKNEPLGWALPGGFVDYGESL
CCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCEECCCCHHHCCCCH
EDAAVREAWEETSLRVAGLRLLGCYSDPRRDARQHTISTVFIATAQGTPRAGDDAAGLAV
HHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHEEEEEEEEECCCCCCCCCCCCCEEE
FPSNKLPATLCFDHRKILDDYLLVTGLSSD
ECCCCCCEEEEHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]