Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is yjgP [C]
Identifier: 39997020
GI number: 39997020
Start: 2100267
End: 2101466
Strand: Direct
Name: yjgP [C]
Synonym: GSU1922
Alternate gene names: 39997020
Gene position: 2100267-2101466 (Clockwise)
Preceding gene: 39997003
Following gene: 39997021
Centisome position: 55.07
GC content: 58.75
Gene sequence:
>1200_bases ATGCCGCACCCCTTCGTGTATCATGACTGCCCAATGTCCCGACTCCTGTTTCGCTATATCTGCACTGAAACCGCGGTCCC CTTTGCACTCGGGCTAACGGTATTCACCTTTGTTCTGCTGATGGGACGCCTCCTGAAGCTCGCCGAGATGGTTTTCGCCC GCGGAGTCCCGTTCCTCGACGTTACCCGCCTTATCCTCTACATGCTTCCTTCATTTTTCCTGGTGGCGATTCCCATGGCA TTTCTCCTTGCGGTGCTCCTGGCCATGGGCCGGCTCTCTGCCGACAGCGAGGTGACCGCCATGAAGGCCAGCGGCATGAG CATAGGAACCATCGCCGTGCCGGTGATCGCCTTCGGGGTCATCACATACGCCGCCACTACGTTTGTCTCGGTCTACGCGC TTCCCTGGGGCAACACCGCGTTCAAGAAGTTCCTCCACGGTGTCATAGAGACGCGCGCCGCCATGAGTATCACGGAAAAG GTCTTTAACGACGAATTTCCCGGCCTCGTGATCTACGTGGACGGCTTTGACCCCAAATCCGGACGGATCAGCGGCATCCT GATCCATGATGAGCGCAACCCCGACGAGCCGTCGACCATCTTCGCCGCTTCCGGCCAGCTGGCTACCAACCCCGAAGAAC GTATCGTTCGCCTGCGGCTGAATAACGGCGGGATTCATCGGGGCATAGGAACCGGCGGCTACCGTCTCGTGGAATTCACC AGCTATGATCTGAGCATTGCCCTGCAGCGGGAGCAGCAAAAGGCTCGCCTCAACGAGGAAGATATGACCCTGGGCGAGCT CCTTGCCCGCATGAAATCCCCCGGCGAACAACCCAAGCTGGTCCGCGAGATGCACTTCGAGCTTCACAAACGTTTTGCCC TCCCTTTCGCCTGCGTAGTGTTTGCGGTCATTGCTGTTCCTCTGGGTATCCAAAACCAGAGATCGGGGCGGGCAGGAGGT TTTGCCGCCGGCATCATCCTGCTCATGCTCTACTACATTCTCATGTCCGCCGGCAAAACCGTCAACGAGAAGGGAATCGC TCCGGCATTCGTTGCCGTTTGGATCCCCAATGTACTGTTCCTCGGCCTCGGGATATTCCTCCTGAAACGAGCGGCACTCG ACCGGGCGATCCCCCTGGCAGAGTATGTGACAACGGCCCTGGCATGGGTGCGGCACAGATTTGAGCGGAGGAAGACGTGA
Upstream 100 bases:
>100_bases CGATGGAAGGCGTGCGTGATTTGAACAGCAAATCCATATACCACAGAGCGCCCGGCTTTAGCAACACCAAAGATTGGCGA GGCTATGCTCTTATATTTAC
Downstream 100 bases:
>100_bases CCATTCTGACCCGCTACATTGCCGGTGCCTACCTGAAAATTCTGGGACTCTGCCTGGCGTCCTTCGTCGCCATTTACCTA GTCATCGACTTTCTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MPHPFVYHDCPMSRLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLDVTRLILYMLPSFFLVAIPMA FLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVSVYALPWGNTAFKKFLHGVIETRAAMSITEK VFNDEFPGLVIYVDGFDPKSGRISGILIHDERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIGTGGYRLVEFT SYDLSIALQREQQKARLNEEDMTLGELLARMKSPGEQPKLVREMHFELHKRFALPFACVVFAVIAVPLGIQNQRSGRAGG FAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWIPNVLFLGLGIFLLKRAALDRAIPLAEYVTTALAWVRHRFERRKT
Sequences:
>Translated_399_residues MPHPFVYHDCPMSRLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLDVTRLILYMLPSFFLVAIPMA FLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVSVYALPWGNTAFKKFLHGVIETRAAMSITEK VFNDEFPGLVIYVDGFDPKSGRISGILIHDERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIGTGGYRLVEFT SYDLSIALQREQQKARLNEEDMTLGELLARMKSPGEQPKLVREMHFELHKRFALPFACVVFAVIAVPLGIQNQRSGRAGG FAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWIPNVLFLGLGIFLLKRAALDRAIPLAEYVTTALAWVRHRFERRKT >Mature_398_residues PHPFVYHDCPMSRLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLDVTRLILYMLPSFFLVAIPMAF LLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVSVYALPWGNTAFKKFLHGVIETRAAMSITEKV FNDEFPGLVIYVDGFDPKSGRISGILIHDERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIGTGGYRLVEFTS YDLSIALQREQQKARLNEEDMTLGELLARMKSPGEQPKLVREMHFELHKRFALPFACVVFAVIAVPLGIQNQRSGRAGGF AAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWIPNVLFLGLGIFLLKRAALDRAIPLAEYVTTALAWVRHRFERRKT
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790712, Length=286, Percent_Identity=22.7272727272727, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 44165; Mature: 44034
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPFVYHDCPMSRLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLD CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VTRLILYMLPSFFLVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHH ITYAATTFVSVYALPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC GRISGILIHDERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIGTGGYRLVEFT CCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEEEEEECCCCEECCCCCCCEEEEEEE SYDLSIALQREQQKARLNEEDMTLGELLARMKSPGEQPKLVREMHFELHKRFALPFACVV CCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHH FAVIAVPLGIQNQRSGRAGGFAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWIPNVLF HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LGLGIFLLKRAALDRAIPLAEYVTTALAWVRHRFERRKT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHPFVYHDCPMSRLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLD CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VTRLILYMLPSFFLVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHH ITYAATTFVSVYALPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC GRISGILIHDERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIGTGGYRLVEFT CCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEEEEEECCCCEECCCCCCCEEEEEEE SYDLSIALQREQQKARLNEEDMTLGELLARMKSPGEQPKLVREMHFELHKRFALPFACVV CCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHH FAVIAVPLGIQNQRSGRAGGFAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWIPNVLF HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LGLGIFLLKRAALDRAIPLAEYVTTALAWVRHRFERRKT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]