Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39996513
Identifier: 39996513
GI number: 39996513
Start: 1550065
End: 1550475
Strand: Reverse
Name: 39996513
Synonym: GSU1412
Alternate gene names: NA
Gene position: 1550475-1550065 (Counterclockwise)
Preceding gene: 39996518
Following gene: 39996512
Centisome position: 40.65
GC content: 60.1
Gene sequence:
>411_bases ATGAACTGGGCGGAACTGTATCAGGCTACAACGGACAAACCCCTCGGCGAGTTCGTCGCGGCGCTGGCCAAGGCCGGCAG CCGGCGAGGGTTCGTCATTCACAATGAGGAAAAGATGGAAATGGCGCATACCTTCGGTGCCCATGGCGTAATGGTTGGCG AAGGGTTCGATCTCCATATGATCCAGGTCTGCAAGCCGAAAAAGGCGGCCGCAAGCCTTCAGAAAAACCCGGAACGGGCC GCTCTCATGCCGAAATTCATCACCACGTTCACCCGCGACGGCAGGACTGAGGTCCGGATGCTCCGCTACCGCAGGCCCAT GATCGAGGCCCTGGTGGACGACACCGAGTTCGCCTCATCCCTGGATGAGAGCTTCGATGCCATCGTGGCCATGATCGAGG AGGCGCGCTGA
Upstream 100 bases:
>100_bases GCCTTGTTCAGAAGCGGCGCCTTCCAGGAAATCGTGCCACCCACCTGCGGGGGTCACGGCCATGGCCACGGCTGCGCTCA CTGAACAGGAGAGATCGATC
Downstream 100 bases:
>100_bases GCGCGCGCAGAGGGCCAAGGCTATGTGGCAACTGCTGAGCAGACTCAACAAGAACCTGGTGCTGACCATTCCCGCCATGA TGGCCGCGGGCTTCGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNWAELYQATTDKPLGEFVAALAKAGSRRGFVIHNEEKMEMAHTFGAHGVMVGEGFDLHMIQVCKPKKAAASLQKNPERA ALMPKFITTFTRDGRTEVRMLRYRRPMIEALVDDTEFASSLDESFDAIVAMIEEAR
Sequences:
>Translated_136_residues MNWAELYQATTDKPLGEFVAALAKAGSRRGFVIHNEEKMEMAHTFGAHGVMVGEGFDLHMIQVCKPKKAAASLQKNPERA ALMPKFITTFTRDGRTEVRMLRYRRPMIEALVDDTEFASSLDESFDAIVAMIEEAR >Mature_136_residues MNWAELYQATTDKPLGEFVAALAKAGSRRGFVIHNEEKMEMAHTFGAHGVMVGEGFDLHMIQVCKPKKAAASLQKNPERA ALMPKFITTFTRDGRTEVRMLRYRRPMIEALVDDTEFASSLDESFDAIVAMIEEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15295; Mature: 15295
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWAELYQATTDKPLGEFVAALAKAGSRRGFVIHNEEKMEMAHTFGAHGVMVGEGFDLHM CCHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCCCEEECCCCCEEH IQVCKPKKAAASLQKNPERAALMPKFITTFTRDGRTEVRMLRYRRPMIEALVDDTEFASS HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH LDESFDAIVAMIEEAR HHHHHHHHHHHHHHCC >Mature Secondary Structure MNWAELYQATTDKPLGEFVAALAKAGSRRGFVIHNEEKMEMAHTFGAHGVMVGEGFDLHM CCHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCCCEEECCCCCEEH IQVCKPKKAAASLQKNPERAALMPKFITTFTRDGRTEVRMLRYRRPMIEALVDDTEFASS HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH LDESFDAIVAMIEEAR HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA