Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39996435
Identifier: 39996435
GI number: 39996435
Start: 1460959
End: 1461432
Strand: Direct
Name: 39996435
Synonym: GSU1333
Alternate gene names: NA
Gene position: 1460959-1461432 (Clockwise)
Preceding gene: 39996434
Following gene: 39996437
Centisome position: 38.3
GC content: 58.02
Gene sequence:
>474_bases ATGAAGAAACTTGCAGTTATCATCGCGGTTGCAGCGCTCGCCCTGGCGGCGCCCCTCACGGTTATGGCCGCTGACCACGG CAAGGGGGGTATGAAGCATGGCGACCATGCCGATCACGGCACCGCGGCTCACGAAGAAGTGGTCGACGGCGTCAAGGCTA CCTTCAAGATCATGAGCATGGCCGAGCACATGAAAGCCATGAACATGGAATTGCCCAAGGGAATGAAGGAGACCCATCAC ATTGCCGTGGAGTTCAAGGATGCCAAAACCGGCAAGGCCATTACCCAGGGCGAGGTGAACCTGAAGGTCCAGGGGCCGGA TAACAAGGCCCAGACCAAGGCGCTGATGGCAATGCAGGGACACTTCGGCGCCGACTTCGACCTCTCCAAAAAGGGGAAAT ACGGCATCATGAGCAAGTTCAAGGTGAAGGACGGCACGGTGCGCAGCGCCAGGTTCTGGTACGAAGTGAAGTAG
Upstream 100 bases:
>100_bases TCGTGCTGATGAAAAAGCACGATCTGAAGAAGGGAAAGCTGAAGTATTCGGGAATGAAGCACTAAGCGAAATCAACACCA CGAAAAAAGGAGAACGCATC
Downstream 100 bases:
>100_bases GGAAGGGCGCCGGAAGGTAACAATGACGAAAGCCCCCGCGTGAAGCAGGGGCTTTCGTCATTGCGGAACGGTTCAGCGCA GGTGCTTCGAGGTGGTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKKLAVIIAVAALALAAPLTVMAADHGKGGMKHGDHADHGTAAHEEVVDGVKATFKIMSMAEHMKAMNMELPKGMKETHH IAVEFKDAKTGKAITQGEVNLKVQGPDNKAQTKALMAMQGHFGADFDLSKKGKYGIMSKFKVKDGTVRSARFWYEVK
Sequences:
>Translated_157_residues MKKLAVIIAVAALALAAPLTVMAADHGKGGMKHGDHADHGTAAHEEVVDGVKATFKIMSMAEHMKAMNMELPKGMKETHH IAVEFKDAKTGKAITQGEVNLKVQGPDNKAQTKALMAMQGHFGADFDLSKKGKYGIMSKFKVKDGTVRSARFWYEVK >Mature_157_residues MKKLAVIIAVAALALAAPLTVMAADHGKGGMKHGDHADHGTAAHEEVVDGVKATFKIMSMAEHMKAMNMELPKGMKETHH IAVEFKDAKTGKAITQGEVNLKVQGPDNKAQTKALMAMQGHFGADFDLSKKGKYGIMSKFKVKDGTVRSARFWYEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16991; Mature: 16991
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLAVIIAVAALALAAPLTVMAADHGKGGMKHGDHADHGTAAHEEVVDGVKATFKIMSM CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AEHMKAMNMELPKGMKETHHIAVEFKDAKTGKAITQGEVNLKVQGPDNKAQTKALMAMQG HHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEECCEEEEEEECCCCHHHHHHHHHHCC HFGADFDLSKKGKYGIMSKFKVKDGTVRSARFWYEVK CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEC >Mature Secondary Structure MKKLAVIIAVAALALAAPLTVMAADHGKGGMKHGDHADHGTAAHEEVVDGVKATFKIMSM CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AEHMKAMNMELPKGMKETHHIAVEFKDAKTGKAITQGEVNLKVQGPDNKAQTKALMAMQG HHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEECCEEEEEEECCCCHHHHHHHHHHCC HFGADFDLSKKGKYGIMSKFKVKDGTVRSARFWYEVK CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA