Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is cusB [H]
Identifier: 39996433
GI number: 39996433
Start: 1456420
End: 1457775
Strand: Direct
Name: cusB [H]
Synonym: GSU1331
Alternate gene names: 39996433
Gene position: 1456420-1457775 (Clockwise)
Preceding gene: 39996432
Following gene: 39996434
Centisome position: 38.18
GC content: 65.34
Gene sequence:
>1356_bases ATGTTGTTCACGAGAAGGATCATGCTGCCGCTGGTGGCGCTTCTGCTGGCCCTGGTCGCTGCTGGCTGCCAGAAGCAGGG GGCCGAAGCCCCCAAAGGGGACGGCCACGACCACGCCGCCGAGGCCAAGGTCGAGTACACCTGCCCCATGCACCCCTTCA TCATCAAGGACAAGCCCGGATCATGTCCTATCTGCGGCATGGACCTGGTGAAGAAGGTCGCCGGAGCCGGCGCCGACGCC AAGGAACTGGAGAAGCTCGCCCAGGTAGCCATCCCCACCACCCAGATGGTGATGGCCAACGTGGCGACCCAGCCCGTGAC GGCCAAAAGCCTCCAGAAGGAGATCACCGCCACGGGGATCGTGGCCTACGACCAGCGGCGCCAGGCCAAGGTAACCGCCT GGGTGGCGGGGCGGATCGATCGGCTCAACGTCAACGCGGTCGGCGACTTCGTCTCCAGGGGACGGCCGGTGGCGGAACTC TATTCGCCCGACCTGGTCTCGGCCCAGCAAGAGTATCTCCTGGCCCTCAAGAGCCGCGACCGGCTCAAGGACTCTCCCAT CGCCTCCATCTCCCAGGGGGGAGAGGGGCTCGTGGCTTCCGCTCGGCAGCGGCTCCTGCTCATGGGAGTGAAGGAACAGC AGATCGCCGGTCTGGAAAAGGCGGGACAGCCCAACATCAAGCTCCCCGTCTATACCCCCCTCTCCGGCGTGGTGATCGAA AAGATCGCCATCGAAGGGCAGTACGTGAACATGGGCGATCCCCTCTTCACCATCGCCGACCTCTCCACGGTCTGGGTCGA GGCCGAGATCTACGAGAGCGACGTCTCCTTCGTCAAGGTGGGGCAGCGGGTCGAGGTGACTTCTGCCTCGTGGCCGGGCA AGACCTTTGCGGGGCGCATCTCCCTGGTCTATCCGTTCCTCGATCCCAAGACTCGGACCATCAAGGCCCGGATCGAGCTC TCCAACCCTGGGCTGAAGCTGAAGCCCGACATGTTCGTCAACGCCGCCATCAAGATGCCCCTGGGCTCGGCCGTTGTCGT CCCCGCTGCGGCGGTGATGGATACCGGAACCCGGCAGGTGGTCTGGGTGCAGGTGAAGGAGGGGACCTTCCAGCCCCGCG ACGTGAAGGTGGGGGCGAGGGTCGGCGACGAGGTGCAGGTACTCTCGGGGCTGACGGCGGGCGAAGTGATCGCCTCCTCC GGCGCGTACCTCATCGACTCGGAATCGCAGTTGCGGGGCGGCTCCGGCACGGGCCACGAAGGGATGCCCGGCATGGAAAA GGAAGGGGTGAAACCGGCCCCGGCCGCGCCTCCCGCCAAGAAGAACGACATGGGCATGGATGACATGAAGATGTGA
Upstream 100 bases:
>100_bases AGTACTACGAGGCCCTGGCCGAGCACGGCATGCGCCGGGCCCAGCTGGAGGCGCTGGTGGGGAGGGAACTGGAGTGAGCC GCCATCGCGAGGGATATGCC
Downstream 100 bases:
>100_bases TGGAGCCGTCATGATCGAGAAAATCATCGAATATTCGGCCCGCAACCGGGTCATCATCCTCATGCTTTTTGCCCTGGTCA TCGGCTGGGGGATCTGGGCC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MLFTRRIMLPLVALLLALVAAGCQKQGAEAPKGDGHDHAAEAKVEYTCPMHPFIIKDKPGSCPICGMDLVKKVAGAGADA KELEKLAQVAIPTTQMVMANVATQPVTAKSLQKEITATGIVAYDQRRQAKVTAWVAGRIDRLNVNAVGDFVSRGRPVAEL YSPDLVSAQQEYLLALKSRDRLKDSPIASISQGGEGLVASARQRLLLMGVKEQQIAGLEKAGQPNIKLPVYTPLSGVVIE KIAIEGQYVNMGDPLFTIADLSTVWVEAEIYESDVSFVKVGQRVEVTSASWPGKTFAGRISLVYPFLDPKTRTIKARIEL SNPGLKLKPDMFVNAAIKMPLGSAVVVPAAAVMDTGTRQVVWVQVKEGTFQPRDVKVGARVGDEVQVLSGLTAGEVIASS GAYLIDSESQLRGGSGTGHEGMPGMEKEGVKPAPAAPPAKKNDMGMDDMKM
Sequences:
>Translated_451_residues MLFTRRIMLPLVALLLALVAAGCQKQGAEAPKGDGHDHAAEAKVEYTCPMHPFIIKDKPGSCPICGMDLVKKVAGAGADA KELEKLAQVAIPTTQMVMANVATQPVTAKSLQKEITATGIVAYDQRRQAKVTAWVAGRIDRLNVNAVGDFVSRGRPVAEL YSPDLVSAQQEYLLALKSRDRLKDSPIASISQGGEGLVASARQRLLLMGVKEQQIAGLEKAGQPNIKLPVYTPLSGVVIE KIAIEGQYVNMGDPLFTIADLSTVWVEAEIYESDVSFVKVGQRVEVTSASWPGKTFAGRISLVYPFLDPKTRTIKARIEL SNPGLKLKPDMFVNAAIKMPLGSAVVVPAAAVMDTGTRQVVWVQVKEGTFQPRDVKVGARVGDEVQVLSGLTAGEVIASS GAYLIDSESQLRGGSGTGHEGMPGMEKEGVKPAPAAPPAKKNDMGMDDMKM >Mature_451_residues MLFTRRIMLPLVALLLALVAAGCQKQGAEAPKGDGHDHAAEAKVEYTCPMHPFIIKDKPGSCPICGMDLVKKVAGAGADA KELEKLAQVAIPTTQMVMANVATQPVTAKSLQKEITATGIVAYDQRRQAKVTAWVAGRIDRLNVNAVGDFVSRGRPVAEL YSPDLVSAQQEYLLALKSRDRLKDSPIASISQGGEGLVASARQRLLLMGVKEQQIAGLEKAGQPNIKLPVYTPLSGVVIE KIAIEGQYVNMGDPLFTIADLSTVWVEAEIYESDVSFVKVGQRVEVTSASWPGKTFAGRISLVYPFLDPKTRTIKARIEL SNPGLKLKPDMFVNAAIKMPLGSAVVVPAAAVMDTGTRQVVWVQVKEGTFQPRDVKVGARVGDEVQVLSGLTAGEVIASS GAYLIDSESQLRGGSGTGHEGMPGMEKEGVKPAPAAPPAKKNDMGMDDMKM
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=397, Percent_Identity=31.2342569269521, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI87081796, Length=318, Percent_Identity=25.4716981132075, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48083; Mature: 48083
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFTRRIMLPLVALLLALVAAGCQKQGAEAPKGDGHDHAAEAKVEYTCPMHPFIIKDKPG CCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC SCPICGMDLVKKVAGAGADAKELEKLAQVAIPTTQMVMANVATQPVTAKSLQKEITATGI CCCEECHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHEE VAYDQRRQAKVTAWVAGRIDRLNVNAVGDFVSRGRPVAELYSPDLVSAQQEYLLALKSRD EEECCCCCEEEEEEEECCCEEEECHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHH RLKDSPIASISQGGEGLVASARQRLLLMGVKEQQIAGLEKAGQPNIKLPVYTPLSGVVIE CCCCCCCHHHHCCCCHHHHHHHHHEEEECCCHHHHHCHHHCCCCCEEEEEECCCCCCEEE KIAIEGQYVNMGDPLFTIADLSTVWVEAEIYESDVSFVKVGQRVEVTSASWPGKTFAGRI EEEECCEEEECCCCEEEEECCEEEEEEEEEECCCCHHHHCCCEEEEECCCCCCCCEECEE SLVYPFLDPKTRTIKARIELSNPGLKLKPDMFVNAAIKMPLGSAVVVPAAAVMDTGTRQV EEEEECCCCCCEEEEEEEEECCCCCEECCCCEEEEEEECCCCCEEHHHHHHHHCCCCCEE VWVQVKEGTFQPRDVKVGARVGDEVQVLSGLTAGEVIASSGAYLIDSESQLRGGSGTGHE EEEEEECCCCCCCCEEECCCCCCHHHHHHCCCHHHHHHCCCCEEEECHHHCCCCCCCCCC GMPGMEKEGVKPAPAAPPAKKNDMGMDDMKM CCCCCHHCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MLFTRRIMLPLVALLLALVAAGCQKQGAEAPKGDGHDHAAEAKVEYTCPMHPFIIKDKPG CCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC SCPICGMDLVKKVAGAGADAKELEKLAQVAIPTTQMVMANVATQPVTAKSLQKEITATGI CCCEECHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHEE VAYDQRRQAKVTAWVAGRIDRLNVNAVGDFVSRGRPVAELYSPDLVSAQQEYLLALKSRD EEECCCCCEEEEEEEECCCEEEECHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHH RLKDSPIASISQGGEGLVASARQRLLLMGVKEQQIAGLEKAGQPNIKLPVYTPLSGVVIE CCCCCCCHHHHCCCCHHHHHHHHHEEEECCCHHHHHCHHHCCCCCEEEEEECCCCCCEEE KIAIEGQYVNMGDPLFTIADLSTVWVEAEIYESDVSFVKVGQRVEVTSASWPGKTFAGRI EEEECCEEEECCCCEEEEECCEEEEEEEEEECCCCHHHHCCCEEEEECCCCCCCCEECEE SLVYPFLDPKTRTIKARIELSNPGLKLKPDMFVNAAIKMPLGSAVVVPAAAVMDTGTRQV EEEEECCCCCCEEEEEEEEECCCCCEECCCCEEEEEEECCCCCEEHHHHHHHHCCCCCEE VWVQVKEGTFQPRDVKVGARVGDEVQVLSGLTAGEVIASSGAYLIDSESQLRGGSGTGHE EEEEEECCCCCCCCEEECCCCCCHHHHHHCCCHHHHHHCCCCEEEECHHHCCCCCCCCCC GMPGMEKEGVKPAPAAPPAKKNDMGMDDMKM CCCCCHHCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]