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The map label for this gene is (hspc4-1 [H]

Identifier: 39995645

GI number: 39995645

Start: 571372

End: 571815

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: GSU0538

Alternate gene names: 39995645

Gene position: 571815-571372 (Counterclockwise)

Preceding gene: 39995646

Following gene: 39995639

Centisome position: 14.99

GC content: 60.14

Gene sequence:

>444_bases
ATGGCAATCGTCAAGTACAGCCCGTTTCGCGACATGATGAATATGCAGGAGCAGATGAACCGGCTTCTGGATCTGGCCTG
GAGCAAGCAGGGCGGGGAAGAGTTGCGGGAAGGGGCCTGGCAGCCCCCCGTGGACATCTTCGAGGATGAAAACGCGGTGA
TCATCAAGGCCGAGCTGCCCGGCATCGACCAGAAGGACATCGAGGTGCGGATCGAGGACAACACCCTCACCATCCGGGGC
GAACGCAAGCACGAGGAAGAGGTCCGCAAGGAGAACTACCATCGGGTGGAACGCTACTACGGCAGCTTCCAGCGGAGCTT
CTCGATCCCCGCCACCATCGACCAGGAGAAGGTCAGGGCCAGCTCCGACAAAGGGGTCCTCACCATCACCCTTCCCAAGC
GGGAGGAGGTGAAGCCCAAGCAGATTACGGTTGAAGTGACCTGA

Upstream 100 bases:

>100_bases
GGGGAGGCGCCGACAGAGGAGGCCTCCCCCTTGACTTTGAAAAACGGGTGATTATGTTGTGATCAGATCGAACACATCAC
CACCAAGGAGGTGCGCAGTC

Downstream 100 bases:

>100_bases
GCATGGGGCGGGCGGCACGATCCTCCTGCCGCGCTTCAAGGAATTCGAGCAGATTCCGGGGAGGAAGGGGACGGGCGATG
TGATACCCCTGGACCACGTC

Product: HSP20 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAIVKYSPFRDMMNMQEQMNRLLDLAWSKQGGEELREGAWQPPVDIFEDENAVIIKAELPGIDQKDIEVRIEDNTLTIRG
ERKHEEEVRKENYHRVERYYGSFQRSFSIPATIDQEKVRASSDKGVLTITLPKREEVKPKQITVEVT

Sequences:

>Translated_147_residues
MAIVKYSPFRDMMNMQEQMNRLLDLAWSKQGGEELREGAWQPPVDIFEDENAVIIKAELPGIDQKDIEVRIEDNTLTIRG
ERKHEEEVRKENYHRVERYYGSFQRSFSIPATIDQEKVRASSDKGVLTITLPKREEVKPKQITVEVT
>Mature_146_residues
AIVKYSPFRDMMNMQEQMNRLLDLAWSKQGGEELREGAWQPPVDIFEDENAVIIKAELPGIDQKDIEVRIEDNTLTIRGE
RKHEEEVRKENYHRVERYYGSFQRSFSIPATIDQEKVRASSDKGVLTITLPKREEVKPKQITVEVT

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17179; Mature: 17048

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVKYSPFRDMMNMQEQMNRLLDLAWSKQGGEELREGAWQPPVDIFEDENAVIIKAELP
CCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCCEEEEEEECC
GIDQKDIEVRIEDNTLTIRGERKHEEEVRKENYHRVERYYGSFQRSFSIPATIDQEKVRA
CCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC
SSDKGVLTITLPKREEVKPKQITVEVT
CCCCCEEEEEECCCCCCCCEEEEEEEC
>Mature Secondary Structure 
AIVKYSPFRDMMNMQEQMNRLLDLAWSKQGGEELREGAWQPPVDIFEDENAVIIKAELP
CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCCEEEEEEECC
GIDQKDIEVRIEDNTLTIRGERKHEEEVRKENYHRVERYYGSFQRSFSIPATIDQEKVRA
CCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC
SSDKGVLTITLPKREEVKPKQITVEVT
CCCCCEEEEEECCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA