| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is trmB
Identifier: 39995628
GI number: 39995628
Start: 554931
End: 555560
Strand: Reverse
Name: trmB
Synonym: GSU0521
Alternate gene names: 39995628
Gene position: 555560-554931 (Counterclockwise)
Preceding gene: 39995630
Following gene: 39995627
Centisome position: 14.57
GC content: 59.84
Gene sequence:
>630_bases ATGCAGCGCATCATCCCCATCGATTCCCCCTTCTTTCTGAACCCTGACGAGCTCGGAACGCCCGCGGACTGGACTGCCGT ATTCGGCAACGACAACCCCCTTGCCCTGGAAATCGGCTGCGGCATCGGCGATTTCATCGCCCGGACCGCCCTCGATCACC CCACAACCAACTTTATCGCCATCGACTATTACAACAAGGGATGCCTCAAAACATGCAGCCGGTTGGAGCGGCACGGGATC ACCAACGTGCGGGTTGTGCGGGCCGAGGCGCGCCAGTTCATCGTGGAGCGGATTCAGAAGGGGTCGCTGGCGGCGGTCTA CATCAACTGCCCCGATCCGTGGCCAAAAAAGCGGCACCGCAAGCGTCGGCTCGTGAACACGCAGTTCGTCCGGTTCATCC GGGACTACCTGGCACCGGGGGGCGATTTCTATTTCGCCACCGACTTTGACGACTACGGCGAGGACGTGGCAGCCTTCATG CCCCAGATGCCGGGGTATGCGAACATGCTGGCTCCCGACATCTTCCGGCACGAACTGGAAGGCTATCACCTCTCCAAATA CATGCAGAAGTTCATGGCCGAGGGAAAACGGATCTACTTCATCCACTACCGCACGACAATGGAGGGGTGA
Upstream 100 bases:
>100_bases ATAACACAGCACGGCGCGTTTCTCAAGCCGGAAGCGCAGTCTTCCTCGTTGACACGCTTTGTGCTATGGTACGCCCACTT TATCGCACCAAGGACAGCCA
Downstream 100 bases:
>100_bases CGCGTGGCGCGCGATGAGCATGACAGCCGTTACCTGACGGCAGAGCTTCCCGGCACGGGCGGCCTCTTCAAGGAAACGCC CGAGGATTTCCTGGTTGAGG
Product: methyltransferase
Products: NA
Alternate protein names: tRNA(m7G46)-methyltransferase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MQRIIPIDSPFFLNPDELGTPADWTAVFGNDNPLALEIGCGIGDFIARTALDHPTTNFIAIDYYNKGCLKTCSRLERHGI TNVRVVRAEARQFIVERIQKGSLAAVYINCPDPWPKKRHRKRRLVNTQFVRFIRDYLAPGGDFYFATDFDDYGEDVAAFM PQMPGYANMLAPDIFRHELEGYHLSKYMQKFMAEGKRIYFIHYRTTMEG
Sequences:
>Translated_209_residues MQRIIPIDSPFFLNPDELGTPADWTAVFGNDNPLALEIGCGIGDFIARTALDHPTTNFIAIDYYNKGCLKTCSRLERHGI TNVRVVRAEARQFIVERIQKGSLAAVYINCPDPWPKKRHRKRRLVNTQFVRFIRDYLAPGGDFYFATDFDDYGEDVAAFM PQMPGYANMLAPDIFRHELEGYHLSKYMQKFMAEGKRIYFIHYRTTMEG >Mature_209_residues MQRIIPIDSPFFLNPDELGTPADWTAVFGNDNPLALEIGCGIGDFIARTALDHPTTNFIAIDYYNKGCLKTCSRLERHGI TNVRVVRAEARQFIVERIQKGSLAAVYINCPDPWPKKRHRKRRLVNTQFVRFIRDYLAPGGDFYFATDFDDYGEDVAAFM PQMPGYANMLAPDIFRHELEGYHLSKYMQKFMAEGKRIYFIHYRTTMEG
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
COG id: COG0220
COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmB family
Homologues:
Organism=Escherichia coli, GI1789330, Length=147, Percent_Identity=34.6938775510204, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TRMB_GEOSL (Q74FT5)
Other databases:
- EMBL: AE017180 - RefSeq: NP_951579.1 - ProteinModelPortal: Q74FT5 - SMR: Q74FT5 - GeneID: 2685959 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU0521 - NMPDR: fig|243231.1.peg.517 - TIGR: GSU0521 - HOGENOM: HBG488510 - OMA: HELEGYH - ProtClustDB: CLSK827898 - BioCyc: GSUL243231:GSU_0521-MONOMER - BRENDA: 2.1.1.33 - HAMAP: MF_01057 - InterPro: IPR003358 - PANTHER: PTHR23417:SF1 - TIGRFAMs: TIGR00091
Pfam domain/function: PF02390 Methyltransf_4
EC number: =2.1.1.33
Molecular weight: Translated: 24130; Mature: 24130
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: BINDING 37-37 BINDING 62-62 BINDING 89-89 BINDING 112-112 BINDING 116-116 BINDING 148-148
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRIIPIDSPFFLNPDELGTPADWTAVFGNDNPLALEIGCGIGDFIARTALDHPTTNFIA CCCEECCCCCCEECHHHCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCEEE IDYYNKGCLKTCSRLERHGITNVRVVRAEARQFIVERIQKGSLAAVYINCPDPWPKKRHR EEECCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH KRRLVNTQFVRFIRDYLAPGGDFYFATDFDDYGEDVAAFMPQMPGYANMLAPDIFRHELE HHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GYHLSKYMQKFMAEGKRIYFIHYRTTMEG CHHHHHHHHHHHHCCCEEEEEEEEEECCC >Mature Secondary Structure MQRIIPIDSPFFLNPDELGTPADWTAVFGNDNPLALEIGCGIGDFIARTALDHPTTNFIA CCCEECCCCCCEECHHHCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCEEE IDYYNKGCLKTCSRLERHGITNVRVVRAEARQFIVERIQKGSLAAVYINCPDPWPKKRHR EEECCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH KRRLVNTQFVRFIRDYLAPGGDFYFATDFDDYGEDVAAFMPQMPGYANMLAPDIFRHELE HHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GYHLSKYMQKFMAEGKRIYFIHYRTTMEG CHHHHHHHHHHHHCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA