| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yggG [C]
Identifier: 39995570
GI number: 39995570
Start: 492743
End: 493816
Strand: Reverse
Name: yggG [C]
Synonym: GSU0462
Alternate gene names: 39995570
Gene position: 493816-492743 (Counterclockwise)
Preceding gene: 39995571
Following gene: 39995569
Centisome position: 12.95
GC content: 65.46
Gene sequence:
>1074_bases ATGAGTGAAGCACGCGGCCTGTTCTACGACGGGATCAGTTCAGCCCAAACCGCGGTCACGCTGGTTGTGGAAGGCTCGAA GCTAAGGGTGCGGGGAGAGGGAATGGAGCGAACCTACCTCATCACCGAGGTGACGGTTTCACCCCGGCTGGCAACGGTCC GCCGCTCCATCCGCTTCCCCGACGGCGCCCTCTGCGAGCTCTCCGACGAACGGTTCGCTGACGGCCTTCTCCACCGCCAG GGACGGGGGCGAAGCTCGGCGGCGCTTCACCGGTGGGAGAGAAGCCTGCCGCGCGCCCTCGTGGCCCTCGTCCTGACCGT CGCGGTCATCGCGGCTTTCGTGACGTATGGCATTCCCGCTCTGGCGAGAAAAGCGGCGTTCGCTATCCCACCATCCACCG AAGAATCCCTGGGGCGGGAAGGGCTTGCACTCCTTGACCGGATGATCTTCACCCCCTCGCAGATCCCTGCCGCGCGCCGC CGGGAACTGACCCGCCTCTTCGCCCGAATGACCCGCGAGCTTCCCTACGCGGGGGGATACCGAATCGAATTCCGGCGGAG CGACCGGCTCGGCGCCAATGCCCTGGCGCTGCCCTCGGGAATCATCGTGGTGACCGACGGCCTGGTGAAACTGGCAAAAA ACGACGACGAAATCGCCGCGGTCCTGGCCCACGAGATGGGGCATGTACGCAACCGCCACGCCCTGCGCCACGTTCTCCAG AATTCCGCTACGGGACTTCTGCTGGCAACCATCACCGGCGACATCACCTCGGTGACATCCCTGTCGGCAGGGCTCCCCAC GGCTCTGGTCGACGCCCGGTTCTCCCGCGAGTTTGAGGTGGAGGCCGACGACGCGGCGGTCGAATATCTCCACGGCAAAA GAATACCGCTTTCCCGGTACGCAGATATCCTGGCCCGGCTCGAACAGGATCACCAGCGCAGAGCCGGGGAAGGAGAGGAC CGGAAGAAAGAGCGTTCGCTCAGCGACTACTTCTCCACCCACCCGGCCACCGACGAACGGATCAGGCGCTTCATGACGAG CGGTGACGGAGCAGGCGCTCCCTCGGGCCGTTGA
Upstream 100 bases:
>100_bases TTGCCACCGGAGACCTGGAGGAGTTTGCCGCGGCACCGACCGAGGAGGTTACGGCCACCGGCGAGGAGATCGGCGACATC TTCGGCATCGATGTGGCCCT
Downstream 100 bases:
>100_bases CAGCCATCACACGGGGCATCGCCCGCCACCTACAGGAGAGACAATCCCATGGAATTTAAGGATAGCATCGTGGTCGTCAC CGGAGGGACCCGCGGGATCG
Product: M48 family peptidase
Products: NA
Alternate protein names: Zn-Dependent Protease With Chaperone Function; Metalloendopeptidase; TPR Repeat-Containing Zn-Dependent Protease; Zinc Metalloprotease With Chaperone Function; Zinc Dependent Protease; M48 Family Peptidase; Metalloprotease Protein; Zinc Metalloendopeptidase; M48 Peptidase Family Protein; Zn-Dependent Protease; Zinc Metalloprotease
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSEARGLFYDGISSAQTAVTLVVEGSKLRVRGEGMERTYLITEVTVSPRLATVRRSIRFPDGALCELSDERFADGLLHRQ GRGRSSAALHRWERSLPRALVALVLTVAVIAAFVTYGIPALARKAAFAIPPSTEESLGREGLALLDRMIFTPSQIPAARR RELTRLFARMTRELPYAGGYRIEFRRSDRLGANALALPSGIIVVTDGLVKLAKNDDEIAAVLAHEMGHVRNRHALRHVLQ NSATGLLLATITGDITSVTSLSAGLPTALVDARFSREFEVEADDAAVEYLHGKRIPLSRYADILARLEQDHQRRAGEGED RKKERSLSDYFSTHPATDERIRRFMTSGDGAGAPSGR
Sequences:
>Translated_357_residues MSEARGLFYDGISSAQTAVTLVVEGSKLRVRGEGMERTYLITEVTVSPRLATVRRSIRFPDGALCELSDERFADGLLHRQ GRGRSSAALHRWERSLPRALVALVLTVAVIAAFVTYGIPALARKAAFAIPPSTEESLGREGLALLDRMIFTPSQIPAARR RELTRLFARMTRELPYAGGYRIEFRRSDRLGANALALPSGIIVVTDGLVKLAKNDDEIAAVLAHEMGHVRNRHALRHVLQ NSATGLLLATITGDITSVTSLSAGLPTALVDARFSREFEVEADDAAVEYLHGKRIPLSRYADILARLEQDHQRRAGEGED RKKERSLSDYFSTHPATDERIRRFMTSGDGAGAPSGR >Mature_356_residues SEARGLFYDGISSAQTAVTLVVEGSKLRVRGEGMERTYLITEVTVSPRLATVRRSIRFPDGALCELSDERFADGLLHRQG RGRSSAALHRWERSLPRALVALVLTVAVIAAFVTYGIPALARKAAFAIPPSTEESLGREGLALLDRMIFTPSQIPAARRR ELTRLFARMTRELPYAGGYRIEFRRSDRLGANALALPSGIIVVTDGLVKLAKNDDEIAAVLAHEMGHVRNRHALRHVLQN SATGLLLATITGDITSVTSLSAGLPTALVDARFSREFEVEADDAAVEYLHGKRIPLSRYADILARLEQDHQRRAGEGEDR KKERSLSDYFSTHPATDERIRRFMTSGDGAGAPSGR
Specific function: Seems To Regulate The Expression Of Speb. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 39198; Mature: 39067
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEARGLFYDGISSAQTAVTLVVEGSKLRVRGEGMERTYLITEVTVSPRLATVRRSIRFP CCCCCCCHHCCCCCCCEEEEEEEECCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHCCC DGALCELSDERFADGLLHRQGRGRSSAALHRWERSLPRALVALVLTVAVIAAFVTYGIPA CCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LARKAAFAIPPSTEESLGREGLALLDRMIFTPSQIPAARRRELTRLFARMTRELPYAGGY HHHHHEECCCCCCHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE RIEFRRSDRLGANALALPSGIIVVTDGLVKLAKNDDEIAAVLAHEMGHVRNRHALRHVLQ EEEEECCCCCCCCCEECCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH NSATGLLLATITGDITSVTSLSAGLPTALVDARFSREFEVEADDAAVEYLHGKRIPLSRY CCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCEECCCCHHHHHHHCCCCCCHHHH ADILARLEQDHQRRAGEGEDRKKERSLSDYFSTHPATDERIRRFMTSGDGAGAPSGR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SEARGLFYDGISSAQTAVTLVVEGSKLRVRGEGMERTYLITEVTVSPRLATVRRSIRFP CCCCCCHHCCCCCCCEEEEEEEECCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHCCC DGALCELSDERFADGLLHRQGRGRSSAALHRWERSLPRALVALVLTVAVIAAFVTYGIPA CCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LARKAAFAIPPSTEESLGREGLALLDRMIFTPSQIPAARRRELTRLFARMTRELPYAGGY HHHHHEECCCCCCHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE RIEFRRSDRLGANALALPSGIIVVTDGLVKLAKNDDEIAAVLAHEMGHVRNRHALRHVLQ EEEEECCCCCCCCCEECCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH NSATGLLLATITGDITSVTSLSAGLPTALVDARFSREFEVEADDAAVEYLHGKRIPLSRY CCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCEECCCCHHHHHHHCCCCCCHHHH ADILARLEQDHQRRAGEGEDRKKERSLSDYFSTHPATDERIRRFMTSGDGAGAPSGR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA