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The map label for this gene is atpB [H]

Identifier: 39995443

GI number: 39995443

Start: 364879

End: 365568

Strand: Reverse

Name: atpB [H]

Synonym: GSU0334

Alternate gene names: 39995443

Gene position: 365568-364879 (Counterclockwise)

Preceding gene: 39995444

Following gene: 39995442

Centisome position: 9.58

GC content: 51.88

Gene sequence:

>690_bases
ATGGTTCATCCGCTTCTATTCCTGCAGTTCTTCAGGAAACTCCTCGAGCCGCTTCACATCTCTGAAGCGGGTGCAGACGC
CATTGCCTACACGTGGCTCATTATTGTCTGCCTGCTTATCGTGTCCCTCATCGCCACAAAAGCACTCAAGGCCGTGCCGA
CCGGAATGCAGAACTTCATGGAAGTCGTGATCGGCGGCATTGAAAACATGGTAGAGGAGACCATGGGCGAAAAGGGAAAG
CCGTATTTCCCGCTCATTGCTACCTTGGCACTCTTTGTTCTCGTTTCAAACCTTATCGGCCTGATTCCCGGTTTCTTTCC
CCCCACTGCAAACCTCAACACGACGGCAGCCTGTGCTGTAATTGTCTTCCTTTCGACACACATTGTCGGCATCAAAAAGC
ATGGTTTCCACTATCTCCAACACTTCATGGGACCGATCTGGTGGCTGGCCCCCCTGATGTTCTTCATTGAGATCATCGGG
CACCTGAGCCGCCCTCTTTCCCTCTCGCTCCGTCTTTTCGGCAACATGAATGGTCACGAGCTGGTGCTCATGATTTTTTT
CGCCCTGGCCCCCTTCCTTGTTCCCCTGCCGATGATGCTTATGGGCGTCCTGGTGTCATTCATCCAGGCATTTGTTTTCA
TGCTTCTCGCTATGATCTATATCCAAGGTTCGCTTGAGGAAGCACACTAA

Upstream 100 bases:

>100_bases
GGTATTGAGGTCTTGGGTCTCACCCTCGGCCTCTCGTTGCTCGTAATTGTCATAACCGCTCTCGCGATTTACATGTTCGT
CACCAAAGGAGATTAGTCCC

Downstream 100 bases:

>100_bases
TCTGCTTACACGAATCCTATACCGTTTAGGATACAACACACCAAAGGGAGGTAGTAACAATGGAATTTTTCACGATGTGC
ATGCTGGCAGCTGGCTTCGG

Product: ATP synthase F0 subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MVHPLLFLQFFRKLLEPLHISEAGADAIAYTWLIIVCLLIVSLIATKALKAVPTGMQNFMEVVIGGIENMVEETMGEKGK
PYFPLIATLALFVLVSNLIGLIPGFFPPTANLNTTAACAVIVFLSTHIVGIKKHGFHYLQHFMGPIWWLAPLMFFIEIIG
HLSRPLSLSLRLFGNMNGHELVLMIFFALAPFLVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEEAH

Sequences:

>Translated_229_residues
MVHPLLFLQFFRKLLEPLHISEAGADAIAYTWLIIVCLLIVSLIATKALKAVPTGMQNFMEVVIGGIENMVEETMGEKGK
PYFPLIATLALFVLVSNLIGLIPGFFPPTANLNTTAACAVIVFLSTHIVGIKKHGFHYLQHFMGPIWWLAPLMFFIEIIG
HLSRPLSLSLRLFGNMNGHELVLMIFFALAPFLVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEEAH
>Mature_229_residues
MVHPLLFLQFFRKLLEPLHISEAGADAIAYTWLIIVCLLIVSLIATKALKAVPTGMQNFMEVVIGGIENMVEETMGEKGK
PYFPLIATLALFVLVSNLIGLIPGFFPPTANLNTTAACAVIVFLSTHIVGIKKHGFHYLQHFMGPIWWLAPLMFFIEIIG
HLSRPLSLSLRLFGNMNGHELVLMIFFALAPFLVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEEAH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Escherichia coli, GI1790176, Length=210, Percent_Identity=30.952380952381, Blast_Score=81, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6226527, Length=212, Percent_Identity=30.6603773584906, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 25469; Mature: 25469

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHPLLFLQFFRKLLEPLHISEAGADAIAYTWLIIVCLLIVSLIATKALKAVPTGMQNFM
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVVIGGIENMVEETMGEKGKPYFPLIATLALFVLVSNLIGLIPGFFPPTANLNTTAACAV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
IVFLSTHIVGIKKHGFHYLQHFMGPIWWLAPLMFFIEIIGHLSRPLSLSLRLFGNMNGHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHH
LVLMIFFALAPFLVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MVHPLLFLQFFRKLLEPLHISEAGADAIAYTWLIIVCLLIVSLIATKALKAVPTGMQNFM
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVVIGGIENMVEETMGEKGKPYFPLIATLALFVLVSNLIGLIPGFFPPTANLNTTAACAV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
IVFLSTHIVGIKKHGFHYLQHFMGPIWWLAPLMFFIEIIGHLSRPLSLSLRLFGNMNGHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHH
LVLMIFFALAPFLVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA