Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39995433
Identifier: 39995433
GI number: 39995433
Start: 354384
End: 354740
Strand: Reverse
Name: 39995433
Synonym: GSU0324
Alternate gene names: NA
Gene position: 354740-354384 (Counterclockwise)
Preceding gene: 39995434
Following gene: 39995432
Centisome position: 9.3
GC content: 59.1
Gene sequence:
>357_bases GTGAGAACCATCGGCGCACGGGGGTTTACCCTGCTCGAAGTAATGATTGCCGTTGCCATCATTGCGGGGGTGGTGTTCAC GGTGATCGGAGTGGTCAACAACCATCTGGCGGTCGCCGGCCGCGATCGGGATGAAGGGGTGGCCGTTCTGCTGGGTCGCC AGATGCTCGACGATCTCGACACCAGACAGGACATTCCCGAAAAGAGCAACGGCACCTTTGCACCGGTTCGACCGGACTAT GCATGGGTAATGACATCCACGGCAACGCAGGTTCCGGGATTCCGGAAGGTAACCGTGGCCATCTCGTGGGATAATGCACG GAGGACGGTGAGCCTTGTTCGCTACGTGGCGAAATAG
Upstream 100 bases:
>100_bases TCCATCTCAAGGCAGAGGGAAGCGACGCCGTTATGACGGTCATGGCCTACCCGTCCTCCGGCAAGGTGAAAGTCGCGGAA GGGTACCGGGAGGAGCCCCT
Downstream 100 bases:
>100_bases CCCCGGCGGCCAACGGGGGTTCACTCTCCTGGAAACCCTGGTGGTAATGCTGCTGCTGGCAGTGGTGGCCGGAGCCCTCT ACTCCAGTTACTTCACCGTG
Product: general secretion pathway protein I
Products: NA
Alternate protein names: General Secretion Pathway Protein I; N-Terminal Methylation
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MRTIGARGFTLLEVMIAVAIIAGVVFTVIGVVNNHLAVAGRDRDEGVAVLLGRQMLDDLDTRQDIPEKSNGTFAPVRPDY AWVMTSTATQVPGFRKVTVAISWDNARRTVSLVRYVAK
Sequences:
>Translated_118_residues MRTIGARGFTLLEVMIAVAIIAGVVFTVIGVVNNHLAVAGRDRDEGVAVLLGRQMLDDLDTRQDIPEKSNGTFAPVRPDY AWVMTSTATQVPGFRKVTVAISWDNARRTVSLVRYVAK >Mature_118_residues MRTIGARGFTLLEVMIAVAIIAGVVFTVIGVVNNHLAVAGRDRDEGVAVLLGRQMLDDLDTRQDIPEKSNGTFAPVRPDY AWVMTSTATQVPGFRKVTVAISWDNARRTVSLVRYVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12886; Mature: 12886
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIGARGFTLLEVMIAVAIIAGVVFTVIGVVNNHLAVAGRDRDEGVAVLLGRQMLDDLD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHH TRQDIPEKSNGTFAPVRPDYAWVMTSTATQVPGFRKVTVAISWDNARRTVSLVRYVAK HHHCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCEEEEEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure MRTIGARGFTLLEVMIAVAIIAGVVFTVIGVVNNHLAVAGRDRDEGVAVLLGRQMLDDLD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHH TRQDIPEKSNGTFAPVRPDYAWVMTSTATQVPGFRKVTVAISWDNARRTVSLVRYVAK HHHCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCEEEEEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA