Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is gspK [H]
Identifier: 39995431
GI number: 39995431
Start: 352860
End: 353780
Strand: Reverse
Name: gspK [H]
Synonym: GSU0322
Alternate gene names: 39995431
Gene position: 353780-352860 (Counterclockwise)
Preceding gene: 39995432
Following gene: 39995430
Centisome position: 9.28
GC content: 62.0
Gene sequence:
>921_bases GTGAGACGATCGGAGTCCGAGCGGGGCTTCGCCCTCATCCTGACCCTCGTGGTGACTGCCCTCCTCATCGCAGTGACCAC CGAGTTCATCCATGGGGTTTATGTGGACACGTCGCTCCACCGCAACTTCGTGAACCTGCAGCAGGCAAGCCTCATGGCCG AGGGAGGGGTAACCGGCGGGATTTCGCTGCTGCGGAACCTTCGCACCTCCGGCAATGACCAGGGGCTGCAGCAGCTCCTT GCTGATCCCGTTCAATTTGAAGATGAAAAGGGACGGGTGAGCATCACCATTGAGGAAGAGGACGGCAAGCTCAACCTGAA TGCCGTCACCCTTCCCAACGGTGACGAACATGTATTTTACGGCCCTGCGGAACGCCGGCTGCTGACCGCTCTCAAGCTGC CGACAGCGCTTCACGACTCGCTGGCCGATTGGCTGGACGCCAATGACGAGCCGCGGCCCGACGGCGGAGAATCTGCCTAC TACCAGTCACTGAGCGCCCCCTATGCCCCCCGCAACGCCCCCTTTGCCACCTTCGGCGAACTGGGGCTCGTCCGGGGAGT GGAACCCGCCGTCCTGGAGCGGCTCCGTCCCTTTGCCACGGTCTTCGTCGACGGGGGGGCCATCAACGTGAACACCGCTC CCCTGCAGGTGCTCATGGCACTTGACGAGGGCATCAGCGAAGGAATCGCCCGGGACATCATGCAACGGCGCCGCATAAAG CCATTCAAAAGCGTTGGGGAATTATCCGAGATTCCCGGCATGGAGACAATCGCCGGGAAACTGTCCGGCTTTGCCGGCGC TCGGGGAAGCACCTATCGTCTCGTTTCCCGGGCAGCGGTGGGCGACGTGACCAGACTTGTGGAAGCAGTGGTGAACCTTG ACGGAACCCAGCCCCGCTATCTCTACTGGAGAGAGTACTGA
Upstream 100 bases:
>100_bases TCCCACGTCTTCCGGAGCGGGTCAGGATAACCATCCGGGTCCGGCAGGGCGACCAGACGGTGGAATTCACTACCCTTGCC CGGCCCAAGGGGCGGCAGTC
Downstream 100 bases:
>100_bases TGACTTATCTGATTCTCGAATGGACCGGCACGGACCTGGTGGCAAGCCGTTTCTTCACCCGGGCGGGTGAACTGGTGTTC CAAGGGCGCGAAAGCCGCCC
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRRSESERGFALILTLVVTALLIAVTTEFIHGVYVDTSLHRNFVNLQQASLMAEGGVTGGISLLRNLRTSGNDQGLQQLL ADPVQFEDEKGRVSITIEEEDGKLNLNAVTLPNGDEHVFYGPAERRLLTALKLPTALHDSLADWLDANDEPRPDGGESAY YQSLSAPYAPRNAPFATFGELGLVRGVEPAVLERLRPFATVFVDGGAINVNTAPLQVLMALDEGISEGIARDIMQRRRIK PFKSVGELSEIPGMETIAGKLSGFAGARGSTYRLVSRAAVGDVTRLVEAVVNLDGTQPRYLYWREY
Sequences:
>Translated_306_residues MRRSESERGFALILTLVVTALLIAVTTEFIHGVYVDTSLHRNFVNLQQASLMAEGGVTGGISLLRNLRTSGNDQGLQQLL ADPVQFEDEKGRVSITIEEEDGKLNLNAVTLPNGDEHVFYGPAERRLLTALKLPTALHDSLADWLDANDEPRPDGGESAY YQSLSAPYAPRNAPFATFGELGLVRGVEPAVLERLRPFATVFVDGGAINVNTAPLQVLMALDEGISEGIARDIMQRRRIK PFKSVGELSEIPGMETIAGKLSGFAGARGSTYRLVSRAAVGDVTRLVEAVVNLDGTQPRYLYWREY >Mature_306_residues MRRSESERGFALILTLVVTALLIAVTTEFIHGVYVDTSLHRNFVNLQQASLMAEGGVTGGISLLRNLRTSGNDQGLQQLL ADPVQFEDEKGRVSITIEEEDGKLNLNAVTLPNGDEHVFYGPAERRLLTALKLPTALHDSLADWLDANDEPRPDGGESAY YQSLSAPYAPRNAPFATFGELGLVRGVEPAVLERLRPFATVFVDGGAINVNTAPLQVLMALDEGISEGIARDIMQRRRIK PFKSVGELSEIPGMETIAGKLSGFAGARGSTYRLVSRAAVGDVTRLVEAVVNLDGTQPRYLYWREY
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 33384; Mature: 33384
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSESERGFALILTLVVTALLIAVTTEFIHGVYVDTSLHRNFVNLQQASLMAEGGVTGG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCHHH ISLLRNLRTSGNDQGLQQLLADPVQFEDEKGRVSITIEEEDGKLNLNAVTLPNGDEHVFY HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCEEEE GPAERRLLTALKLPTALHDSLADWLDANDEPRPDGGESAYYQSLSAPYAPRNAPFATFGE CCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHH LGLVRGVEPAVLERLRPFATVFVDGGAINVNTAPLQVLMALDEGISEGIARDIMQRRRIK HHHHCCCCHHHHHHHCHHEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PFKSVGELSEIPGMETIAGKLSGFAGARGSTYRLVSRAAVGDVTRLVEAVVNLDGTQPRY HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LYWREY EEEECC >Mature Secondary Structure MRRSESERGFALILTLVVTALLIAVTTEFIHGVYVDTSLHRNFVNLQQASLMAEGGVTGG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCHHH ISLLRNLRTSGNDQGLQQLLADPVQFEDEKGRVSITIEEEDGKLNLNAVTLPNGDEHVFY HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCEEEE GPAERRLLTALKLPTALHDSLADWLDANDEPRPDGGESAYYQSLSAPYAPRNAPFATFGE CCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHH LGLVRGVEPAVLERLRPFATVFVDGGAINVNTAPLQVLMALDEGISEGIARDIMQRRRIK HHHHCCCCHHHHHHHCHHEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PFKSVGELSEIPGMETIAGKLSGFAGARGSTYRLVSRAAVGDVTRLVEAVVNLDGTQPRY HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LYWREY EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1588814; 10984043 [H]