Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39995429
Identifier: 39995429
GI number: 39995429
Start: 350999
End: 351547
Strand: Reverse
Name: 39995429
Synonym: GSU0320
Alternate gene names: NA
Gene position: 351547-350999 (Counterclockwise)
Preceding gene: 39995430
Following gene: 39995428
Centisome position: 9.22
GC content: 59.38
Gene sequence:
>549_bases ATGAGTGCGCTTAACAGAATCCGCGACACATGGAACGACATGGATCGCCCCACCCGCTTGCGCTGGGGCTACGGGGTCAT AGCCATCCTCGCCCTCGCCGTGATTTTTTCCTTCGTGTACAACCGGATCGGCCTTCTGGAGAACAAGCGGCAACGACGTG AAGCGGACCTGGTGGAAATGCTCCGCCTGAAGGGGCGCTACCAGGAGGCCCGCAGCACATCCATGCGCCTTGCAAACAGG CTGGCCGCGGTCCGCGCAGACGATTCGCCCGCAAAGCTCGTGGAAGAAACCGGCATCCGCGGCAAATCGCTTCGCATCAC CCCTCTCAAAACCGAACTGAAAAACGGTTTTACCGAGGAAGCAGCCGACATCAAAATTGACAGTCTCACGGCAAATGAAG CCGTCAATCTCCTTCACCGCATCGAGAAGGGCCAACGCCCCGCCATTATCAGAAAAGCATTGCTGCGCACCCGCTTCGAC GACCCGTCAAAACTCGACCTGACTCTTACCGTGGCACTGCTGCGCGGCGCACCTCAGGGGGCGCGATGA
Upstream 100 bases:
>100_bases TTGCCGGCGTCCTGGCCGGAGCAGAGGTGGGACAGATCACGGCAAAACCGGACGGGTCCGTCACGTTCTCCCTCAGGGGG ACCATCAGCGAGGTGGCGAA
Downstream 100 bases:
>100_bases CGGCACAGCGCTGGCTCGCCTGGGGCGCCGGCATCATCGCCGGCCTGCTCCTCATCCTAATCTTCACCCTTCTTCTGGTC CCCTCGCGGGAACTGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSALNRIRDTWNDMDRPTRLRWGYGVIAILALAVIFSFVYNRIGLLENKRQRREADLVEMLRLKGRYQEARSTSMRLANR LAAVRADDSPAKLVEETGIRGKSLRITPLKTELKNGFTEEAADIKIDSLTANEAVNLLHRIEKGQRPAIIRKALLRTRFD DPSKLDLTLTVALLRGAPQGAR
Sequences:
>Translated_182_residues MSALNRIRDTWNDMDRPTRLRWGYGVIAILALAVIFSFVYNRIGLLENKRQRREADLVEMLRLKGRYQEARSTSMRLANR LAAVRADDSPAKLVEETGIRGKSLRITPLKTELKNGFTEEAADIKIDSLTANEAVNLLHRIEKGQRPAIIRKALLRTRFD DPSKLDLTLTVALLRGAPQGAR >Mature_181_residues SALNRIRDTWNDMDRPTRLRWGYGVIAILALAVIFSFVYNRIGLLENKRQRREADLVEMLRLKGRYQEARSTSMRLANRL AAVRADDSPAKLVEETGIRGKSLRITPLKTELKNGFTEEAADIKIDSLTANEAVNLLHRIEKGQRPAIIRKALLRTRFDD PSKLDLTLTVALLRGAPQGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20636; Mature: 20505
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALNRIRDTWNDMDRPTRLRWGYGVIAILALAVIFSFVYNRIGLLENKRQRREADLVEM CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLKGRYQEARSTSMRLANRLAAVRADDSPAKLVEETGIRGKSLRITPLKTELKNGFTEE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEECHHHHHHHCCCCHH AADIKIDSLTANEAVNLLHRIEKGQRPAIIRKALLRTRFDDPSKLDLTLTVALLRGAPQG HHCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC AR CC >Mature Secondary Structure SALNRIRDTWNDMDRPTRLRWGYGVIAILALAVIFSFVYNRIGLLENKRQRREADLVEM CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLKGRYQEARSTSMRLANRLAAVRADDSPAKLVEETGIRGKSLRITPLKTELKNGFTEE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEECHHHHHHHCCCCHH AADIKIDSLTANEAVNLLHRIEKGQRPAIIRKALLRTRFDDPSKLDLTLTVALLRGAPQG HHCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA