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The map label for this gene is 39995388

Identifier: 39995388

GI number: 39995388

Start: 288582

End: 289847

Strand: Reverse

Name: 39995388

Synonym: GSU0278

Alternate gene names: NA

Gene position: 289847-288582 (Counterclockwise)

Preceding gene: 39995389

Following gene: 39995387

Centisome position: 7.6

GC content: 61.53

Gene sequence:

>1266_bases
GTGGGCAGTGTAAGAACTCGGGTGCTTGGTGCGGTCATCGGCGCATTATGTCTGGCCGCTACCGCATGGGGCCAGGAGGC
GCCGATGACCGGGGACGGACTCGACGTGGCCCTGAACTTCGCGGCGATCGGTCATCCATCCATCAAAAGTCAGGTTGCCG
AACTGAAGGCTCTCGGTTCGGACCTGAAGTCGGCCGAGTATAAGCGCTATCCGGCGCTTACCATCCAGGCCCAGACCATG
ACCAACAACCAGAACCAGGTCGTAGCGGTTGTGCAGCAGCCGCTGTGGGTCGGCGGACGCATTGACGGCGGGATCGAGCA
GGCGGATGTGGGGCTGCGAATCGGCAGAGCTGCGCTGCTCGACGTACGGCGCCGGGTCATGGAAGAGACCTCGGCGGCCT
ACGCCACGCTGAGAGGGGCGCTTCAACGCCTGAAGGCGGCTGAACTCAATGTCGGCGAGCATGAAAAGCTTAAAGGGCTC
GTCAGCCGGCGAGTTGAGGGAGGGGTTGCCTCCAACGCCGATATCCTGCTGGCCGAATCCCGTTTGTCTCAGGCCATTGC
CCAGCGCATCCAGCTTAAAGGGGCGGTGTCCCGCGCCCGAAGCGATCTGCTGGCTCTGACCCAGCAGCCGGTAGCCGGCA
ACGAACCCGTCCCGGCCCATCTTCTGGAGCTGCCTGAGCCCGAGCGGATGGCGGAGATGATCGTCAAAACTTCCGCCACA
GTGGAGCAGCGGATTCTCAAGGTAGAGGATGCACGGATCACGTCTCGCTTGGCTGTTGCCTCAATGATGCCGGCCCTCTA
TGCGAAGGTCGAGCAGAACGTCTACGTGGCCGAGAGATATGGCGAAACACCCCATGAAACCCGTTTCGGCGTGGTACTGC
AGGGGAGTGTCGAGGGGCTCGGCCTTTCGGGATGGAAGAAGGTCAAAGCGTCCGACTCACGGATAGACGCGGCACGAAAA
GAGGTTGCCGCAGCCGAGAACGACGTGCGGCGTCAGGCGGAGGCTCTGGTAACCGATATCCTGAGCCTCCGGCAGGTAGT
TCGTAGCTACGAGCTGCTGGTCACGTCAACGGAAGAGACCCTCGCGTCATTTTTGCGACAGTACGATGCCGGCCGCAAGA
GCTGGGTTGATGTCCTGAATGCCCAGCGCGAATTTTCTGAAGCAAGAATTTCTCTCGAACAGGCGCGAAGCTCCCTTGAG
GAGGCCTCGCTCCGCCTGGCCGCCCGGTTGGGACAGCTTGATTCATTCACGGGAGGGAACGAATGA

Upstream 100 bases:

>100_bases
ATAAACAGGCTGCCCGTCCGGGCTGGGCGGGCAGCCTGCTTGTTTATGGATCAGTGCACTCCCCCTGGACGAGGCGGGAG
CATGACAGAAAGGGATTTTC

Downstream 100 bases:

>100_bases
GGCCCCAAGGGCACGAGACTGTTATTTTCGGCGAAAACAGCCTGGCAACGCCGATCGAGGCCCCTGTCCTCGCTCGCCTG
CTGCTGAAGATCGGACTGCC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Protein; OMF Family Outer Membrane Efflux Protein

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MGSVRTRVLGAVIGALCLAATAWGQEAPMTGDGLDVALNFAAIGHPSIKSQVAELKALGSDLKSAEYKRYPALTIQAQTM
TNNQNQVVAVVQQPLWVGGRIDGGIEQADVGLRIGRAALLDVRRRVMEETSAAYATLRGALQRLKAAELNVGEHEKLKGL
VSRRVEGGVASNADILLAESRLSQAIAQRIQLKGAVSRARSDLLALTQQPVAGNEPVPAHLLELPEPERMAEMIVKTSAT
VEQRILKVEDARITSRLAVASMMPALYAKVEQNVYVAERYGETPHETRFGVVLQGSVEGLGLSGWKKVKASDSRIDAARK
EVAAAENDVRRQAEALVTDILSLRQVVRSYELLVTSTEETLASFLRQYDAGRKSWVDVLNAQREFSEARISLEQARSSLE
EASLRLAARLGQLDSFTGGNE

Sequences:

>Translated_421_residues
MGSVRTRVLGAVIGALCLAATAWGQEAPMTGDGLDVALNFAAIGHPSIKSQVAELKALGSDLKSAEYKRYPALTIQAQTM
TNNQNQVVAVVQQPLWVGGRIDGGIEQADVGLRIGRAALLDVRRRVMEETSAAYATLRGALQRLKAAELNVGEHEKLKGL
VSRRVEGGVASNADILLAESRLSQAIAQRIQLKGAVSRARSDLLALTQQPVAGNEPVPAHLLELPEPERMAEMIVKTSAT
VEQRILKVEDARITSRLAVASMMPALYAKVEQNVYVAERYGETPHETRFGVVLQGSVEGLGLSGWKKVKASDSRIDAARK
EVAAAENDVRRQAEALVTDILSLRQVVRSYELLVTSTEETLASFLRQYDAGRKSWVDVLNAQREFSEARISLEQARSSLE
EASLRLAARLGQLDSFTGGNE
>Mature_420_residues
GSVRTRVLGAVIGALCLAATAWGQEAPMTGDGLDVALNFAAIGHPSIKSQVAELKALGSDLKSAEYKRYPALTIQAQTMT
NNQNQVVAVVQQPLWVGGRIDGGIEQADVGLRIGRAALLDVRRRVMEETSAAYATLRGALQRLKAAELNVGEHEKLKGLV
SRRVEGGVASNADILLAESRLSQAIAQRIQLKGAVSRARSDLLALTQQPVAGNEPVPAHLLELPEPERMAEMIVKTSATV
EQRILKVEDARITSRLAVASMMPALYAKVEQNVYVAERYGETPHETRFGVVLQGSVEGLGLSGWKKVKASDSRIDAARKE
VAAAENDVRRQAEALVTDILSLRQVVRSYELLVTSTEETLASFLRQYDAGRKSWVDVLNAQREFSEARISLEQARSSLEE
ASLRLAARLGQLDSFTGGNE

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45585; Mature: 45453

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSVRTRVLGAVIGALCLAATAWGQEAPMTGDGLDVALNFAAIGHPSIKSQVAELKALGS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHH
DLKSAEYKRYPALTIQAQTMTNNQNQVVAVVQQPLWVGGRIDGGIEQADVGLRIGRAALL
HHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHH
DVRRRVMEETSAAYATLRGALQRLKAAELNVGEHEKLKGLVSRRVEGGVASNADILLAES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHH
RLSQAIAQRIQLKGAVSRARSDLLALTQQPVAGNEPVPAHLLELPEPERMAEMIVKTSAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH
VEQRILKVEDARITSRLAVASMMPALYAKVEQNVYVAERYGETPHETRFGVVLQGSVEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCCCEEEEEEECCCCCC
GLSGWKKVKASDSRIDAARKEVAAAENDVRRQAEALVTDILSLRQVVRSYELLVTSTEET
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHH
LASFLRQYDAGRKSWVDVLNAQREFSEARISLEQARSSLEEASLRLAARLGQLDSFTGGN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
E
C
>Mature Secondary Structure 
GSVRTRVLGAVIGALCLAATAWGQEAPMTGDGLDVALNFAAIGHPSIKSQVAELKALGS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHH
DLKSAEYKRYPALTIQAQTMTNNQNQVVAVVQQPLWVGGRIDGGIEQADVGLRIGRAALL
HHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHH
DVRRRVMEETSAAYATLRGALQRLKAAELNVGEHEKLKGLVSRRVEGGVASNADILLAES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHH
RLSQAIAQRIQLKGAVSRARSDLLALTQQPVAGNEPVPAHLLELPEPERMAEMIVKTSAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH
VEQRILKVEDARITSRLAVASMMPALYAKVEQNVYVAERYGETPHETRFGVVLQGSVEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCCCEEEEEEECCCCCC
GLSGWKKVKASDSRIDAARKEVAAAENDVRRQAEALVTDILSLRQVVRSYELLVTSTEET
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHH
LASFLRQYDAGRKSWVDVLNAQREFSEARISLEQARSSLEEASLRLAARLGQLDSFTGGN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA