Click here to switch to the map view.

The map label for this gene is 39995384

Identifier: 39995384

GI number: 39995384

Start: 282877

End: 284736

Strand: Direct

Name: 39995384

Synonym: GSU0274

Alternate gene names: NA

Gene position: 282877-284736 (Clockwise)

Preceding gene: 39995383

Following gene: 39995391

Centisome position: 7.42

GC content: 59.25

Gene sequence:

>1860_bases
ATGTTGTCCACGTTTCTCCGGCTGTTCCCCGCGTTTCTGCTGTTCGTGACCCTCGCCGGCACGGCAGCGGCCGAGAGCGG
CATGGCGATTGATCCCGCCACCTGTCTCGGCTGTCACAGCAACAAGATTTCGGCCGCGGCGTTCTCTGCCTCGGTACACG
GCAAGAATGCCTGTACCAGCTGTCACGTGGAGATCACCGATCTGACCAAGCACATGAAGGGTGAGGTCAAGGTCGAAAAG
GTGCGCTGCGAACGGTGCCACAAGAAGGAAAACGCCGAACACTACTCCAGTGTCCATGCCCAGAAAGATGTCAGGTGCGC
TGACTGCCACACCGATATCCACACCCACTCCTACTGGAACAAGGATAAGCGCAAGGTCGTGGCCAAGTGTATCCAGTGCC
ACGATAAGGAGGCCGGTTACCGCAACTCGATCCACGGCAAGGGCGTCGCGGCCGGGAACATGGATTCGGCAGCCTGCAAC
GACTGCCACAACCTGCATGACATCAAACCGCTGGGTGATCCCAAGTCCAAGGAAAACAGAGAGTTCCATACCAAGGTGTG
TCTGAAGTGTCACGCCGACGAGAAGATGATGGAGCGCAACAACGTCTTCACCGTCGCCGTCAAGACCTACATGGACAGCT
ACCACGGCAAGAACTACCGTCTCGGCTTCCCCGAGAAGGTCGCCGGCTGCGCCGACTGCCACACCGCCCACGGCGTGCTC
CCGGCCAAGGATCCCAACTCCAGCGTTAATCCCCAGAACCTGGTCGCCACCTGCGCCAAGTGCCACCCGAAGGCGACCCC
CCTCTTCACCAAGTTCTACTCCCACGGTGAGCTTGGCGATCGTGAGAAGTACCCGATCCTCTACTACACCTTCATCGCCA
TGACCGGCCTGCTCGTCAGCACCTTCGCCGTGTTCTGGATTCACACGCTGCTCTGGATGTTCCGCGGCTTCGTGGAAAAC
CGCGAGAAGCAACAGGCGCTCATTCACGGCCATGCCGAGCACCACATCCCCGATGGGCACAAGGTGTACCGCCGCTTCAA
GCGTCGCCACATTTTCCTCCATCTCCTGGTCATCATCAGCTTCCTGATCCTGTCTCTCTCGGGTCTGCCGCTCAAGTTCA
GCAGCCAGCACTGGGCGAAGTTCATGATGGATCACATCTTCGGGCACTCGGCCAATGCCGCGCTCGTTCACCGCATCGGT
GCCGGCATCACCTTCGTCTACTTCGCGGGTGCTCTGCTCCTGTCCTTCCACTTCCTCTTCGTCCGGAAGGATATCAAGGG
TAACTGGCTCCAGCGCATGTTCGGACCCGACTCTCTCATGCCCAACTTCCGCGACATCAAGGATGTGGCGGGGATGGTCC
GCTGGTTCCTGTTCCGGGGGCCGAAGCCGACCTTCGAGCGCTGGACCTACTGGGAGAAATTCGACTTCATCGCGGTCTTC
TGGGGTATGTTTGCCATCGGCGGCTCGGGCCTGATGCTCTGGTTCCCTGAGTTCTTCGGTAGCTTCCTGCCGGGCTGGAT
GTTCAACGTGGCCACCATCGTCCACTCCGACGAGGCGCTGCTTGCTACCGGCTTCATCTTCACGGTCCACTTCTTCAACA
CCCACGGCAGGCCCGAGAAGTTCCCGATGGACTTCGTCATCTTCAATGGTCAGATGCCGAAACATGAGTTCATCGAAGAG
CGCGGCGACCAGTGGAAGCGCTATGAGGAACTCGGCATCACCGAGGAATTCGCCGCCAAGAAAACCAGTGGCGTCGTCTA
TGACTTCATCGTGAAAGGCTTTGGTTTCACCGCGGTAGTCATCGGCCTCACCCTGGTCGTGCTCATGCTGTACGCCTTCC
TGAGCGGAGGCGCGCACTGA

Upstream 100 bases:

>100_bases
GTCAATAATGCGCCCTGACTGGAAATGGGTTTGAGTATTAATGGGCGATACCGTGTTCTATTTGTGTGAATAGAATACAC
CAACAGAGGAGGAGTTATAT

Downstream 100 bases:

>100_bases
TCTTTCAGTAGCGGCATCGCAGGAACGAAAAGGGGGAACCGGTCAACCGGTTCCCCCTTTGCATTTGCGAAGTAACGCTG
TGGAGCCCCCGCACTTTTCG

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome B Subunit Of Formate Dehydrogenase-Like Protein; Deca-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome-Like Protein; Cytochrome B/B6 Domain; Multiheme C-Type Cytochrome; Cytochrome B Subunit Of Formate Dehydrogenase-Like; Deca-Heme C-Type Cytochrome-Like; FfdnI Cytochromesubunit B Of Formate Dehydrogenase; Cytochrome C

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MLSTFLRLFPAFLLFVTLAGTAAAESGMAIDPATCLGCHSNKISAAAFSASVHGKNACTSCHVEITDLTKHMKGEVKVEK
VRCERCHKKENAEHYSSVHAQKDVRCADCHTDIHTHSYWNKDKRKVVAKCIQCHDKEAGYRNSIHGKGVAAGNMDSAACN
DCHNLHDIKPLGDPKSKENREFHTKVCLKCHADEKMMERNNVFTVAVKTYMDSYHGKNYRLGFPEKVAGCADCHTAHGVL
PAKDPNSSVNPQNLVATCAKCHPKATPLFTKFYSHGELGDREKYPILYYTFIAMTGLLVSTFAVFWIHTLLWMFRGFVEN
REKQQALIHGHAEHHIPDGHKVYRRFKRRHIFLHLLVIISFLILSLSGLPLKFSSQHWAKFMMDHIFGHSANAALVHRIG
AGITFVYFAGALLLSFHFLFVRKDIKGNWLQRMFGPDSLMPNFRDIKDVAGMVRWFLFRGPKPTFERWTYWEKFDFIAVF
WGMFAIGGSGLMLWFPEFFGSFLPGWMFNVATIVHSDEALLATGFIFTVHFFNTHGRPEKFPMDFVIFNGQMPKHEFIEE
RGDQWKRYEELGITEEFAAKKTSGVVYDFIVKGFGFTAVVIGLTLVVLMLYAFLSGGAH

Sequences:

>Translated_619_residues
MLSTFLRLFPAFLLFVTLAGTAAAESGMAIDPATCLGCHSNKISAAAFSASVHGKNACTSCHVEITDLTKHMKGEVKVEK
VRCERCHKKENAEHYSSVHAQKDVRCADCHTDIHTHSYWNKDKRKVVAKCIQCHDKEAGYRNSIHGKGVAAGNMDSAACN
DCHNLHDIKPLGDPKSKENREFHTKVCLKCHADEKMMERNNVFTVAVKTYMDSYHGKNYRLGFPEKVAGCADCHTAHGVL
PAKDPNSSVNPQNLVATCAKCHPKATPLFTKFYSHGELGDREKYPILYYTFIAMTGLLVSTFAVFWIHTLLWMFRGFVEN
REKQQALIHGHAEHHIPDGHKVYRRFKRRHIFLHLLVIISFLILSLSGLPLKFSSQHWAKFMMDHIFGHSANAALVHRIG
AGITFVYFAGALLLSFHFLFVRKDIKGNWLQRMFGPDSLMPNFRDIKDVAGMVRWFLFRGPKPTFERWTYWEKFDFIAVF
WGMFAIGGSGLMLWFPEFFGSFLPGWMFNVATIVHSDEALLATGFIFTVHFFNTHGRPEKFPMDFVIFNGQMPKHEFIEE
RGDQWKRYEELGITEEFAAKKTSGVVYDFIVKGFGFTAVVIGLTLVVLMLYAFLSGGAH
>Mature_619_residues
MLSTFLRLFPAFLLFVTLAGTAAAESGMAIDPATCLGCHSNKISAAAFSASVHGKNACTSCHVEITDLTKHMKGEVKVEK
VRCERCHKKENAEHYSSVHAQKDVRCADCHTDIHTHSYWNKDKRKVVAKCIQCHDKEAGYRNSIHGKGVAAGNMDSAACN
DCHNLHDIKPLGDPKSKENREFHTKVCLKCHADEKMMERNNVFTVAVKTYMDSYHGKNYRLGFPEKVAGCADCHTAHGVL
PAKDPNSSVNPQNLVATCAKCHPKATPLFTKFYSHGELGDREKYPILYYTFIAMTGLLVSTFAVFWIHTLLWMFRGFVEN
REKQQALIHGHAEHHIPDGHKVYRRFKRRHIFLHLLVIISFLILSLSGLPLKFSSQHWAKFMMDHIFGHSANAALVHRIG
AGITFVYFAGALLLSFHFLFVRKDIKGNWLQRMFGPDSLMPNFRDIKDVAGMVRWFLFRGPKPTFERWTYWEKFDFIAVF
WGMFAIGGSGLMLWFPEFFGSFLPGWMFNVATIVHSDEALLATGFIFTVHFFNTHGRPEKFPMDFVIFNGQMPKHEFIEE
RGDQWKRYEELGITEEFAAKKTSGVVYDFIVKGFGFTAVVIGLTLVVLMLYAFLSGGAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70261; Mature: 70261

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTFLRLFPAFLLFVTLAGTAAAESGMAIDPATCLGCHSNKISAAAFSASVHGKNACTS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHEECCCCCCCCCCE
CHVEITDLTKHMKGEVKVEKVRCERCHKKENAEHYSSVHAQKDVRCADCHTDIHTHSYWN
EEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCCCHHHHHCC
KDKRKVVAKCIQCHDKEAGYRNSIHGKGVAAGNMDSAACNDCHNLHDIKPLGDPKSKENR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
EFHTKVCLKCHADEKMMERNNVFTVAVKTYMDSYHGKNYRLGFPEKVAGCADCHTAHGVL
HHHHHHHHHCCCCHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHCCCC
PAKDPNSSVNPQNLVATCAKCHPKATPLFTKFYSHGELGDREKYPILYYTFIAMTGLLVS
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
TFAVFWIHTLLWMFRGFVENREKQQALIHGHAEHHIPDGHKVYRRFKRRHIFLHLLVIIS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FLILSLSGLPLKFSSQHWAKFMMDHIFGHSANAALVHRIGAGITFVYFAGALLLSFHFLF
HHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRKDIKGNWLQRMFGPDSLMPNFRDIKDVAGMVRWFLFRGPKPTFERWTYWEKFDFIAVF
HHHCCCCHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
WGMFAIGGSGLMLWFPEFFGSFLPGWMFNVATIVHSDEALLATGFIFTVHFFNTHGRPEK
HHHHHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCCCCCC
FPMDFVIFNGQMPKHEFIEERGDQWKRYEELGITEEFAAKKTSGVVYDFIVKGFGFTAVV
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCHHHHH
IGLTLVVLMLYAFLSGGAH
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLSTFLRLFPAFLLFVTLAGTAAAESGMAIDPATCLGCHSNKISAAAFSASVHGKNACTS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHEECCCCCCCCCCE
CHVEITDLTKHMKGEVKVEKVRCERCHKKENAEHYSSVHAQKDVRCADCHTDIHTHSYWN
EEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCCCHHHHHCC
KDKRKVVAKCIQCHDKEAGYRNSIHGKGVAAGNMDSAACNDCHNLHDIKPLGDPKSKENR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
EFHTKVCLKCHADEKMMERNNVFTVAVKTYMDSYHGKNYRLGFPEKVAGCADCHTAHGVL
HHHHHHHHHCCCCHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHCCCC
PAKDPNSSVNPQNLVATCAKCHPKATPLFTKFYSHGELGDREKYPILYYTFIAMTGLLVS
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
TFAVFWIHTLLWMFRGFVENREKQQALIHGHAEHHIPDGHKVYRRFKRRHIFLHLLVIIS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FLILSLSGLPLKFSSQHWAKFMMDHIFGHSANAALVHRIGAGITFVYFAGALLLSFHFLF
HHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRKDIKGNWLQRMFGPDSLMPNFRDIKDVAGMVRWFLFRGPKPTFERWTYWEKFDFIAVF
HHHCCCCHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
WGMFAIGGSGLMLWFPEFFGSFLPGWMFNVATIVHSDEALLATGFIFTVHFFNTHGRPEK
HHHHHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCCCCCC
FPMDFVIFNGQMPKHEFIEERGDQWKRYEELGITEEFAAKKTSGVVYDFIVKGFGFTAVV
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCHHHHH
IGLTLVVLMLYAFLSGGAH
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA