| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995334
Identifier: 39995334
GI number: 39995334
Start: 232204
End: 232536
Strand: Reverse
Name: 39995334
Synonym: GSU0224
Alternate gene names: NA
Gene position: 232536-232204 (Counterclockwise)
Preceding gene: 39995338
Following gene: 39995326
Centisome position: 6.1
GC content: 63.36
Gene sequence:
>333_bases ATGAGCACAGGAAACGAAACTCTCGCGGGACGCGCCATCGGCATGTCCGAGCTGGCCCAGTACCAACCCGGCTCGGTCGT GAGCCGCACCCTCATCGACAAGAAGATCGGCACCATCACCCTGTTCGCCTTTGACGAAGGCCAGGGACTCAGCGAGCACA CGGCCCCCTATGATGCCTTTGTCCAGATCGTGGACGGCGTCGCCGACATTACCATCGACGGCCAGGTCCACCGGGTCGCC GCCGGGCAGATGATCATCATGCCCGCGGATCGCCCCCACGCTCTGAGGGCCGTGGAACGGTTCAAGATGCTGCTGGTGAT GATCAGGGCCTGA
Upstream 100 bases:
>100_bases GGCAAAGAACCGCAATCGCCTTCCTTGACTCCCGTCAATGGCGATTCGCCCCGGATACGGCATACTGTACCCATACCACA ACAAAGCACGGGAGGATATC
Downstream 100 bases:
>100_bases CGGGTACCGGCGCTGCTCCCTTATCGGAGGAGCAGCGCCAGGGCCATCAGGGGCGGAAATGCATTGAGGCAGGAAAAAAG CGTTGCTTCGGAGCGAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; 5-Nucleotidase SurE; Cytoplasmic Protein; Cupin Domain Containing Protein; Cupin Domain Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Conserved Barrel Protein; Cupin Domain-Containing Protein
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSTGNETLAGRAIGMSELAQYQPGSVVSRTLIDKKIGTITLFAFDEGQGLSEHTAPYDAFVQIVDGVADITIDGQVHRVA AGQMIIMPADRPHALRAVERFKMLLVMIRA
Sequences:
>Translated_110_residues MSTGNETLAGRAIGMSELAQYQPGSVVSRTLIDKKIGTITLFAFDEGQGLSEHTAPYDAFVQIVDGVADITIDGQVHRVA AGQMIIMPADRPHALRAVERFKMLLVMIRA >Mature_109_residues STGNETLAGRAIGMSELAQYQPGSVVSRTLIDKKIGTITLFAFDEGQGLSEHTAPYDAFVQIVDGVADITIDGQVHRVAA GQMIIMPADRPHALRAVERFKMLLVMIRA
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11899; Mature: 11768
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGNETLAGRAIGMSELAQYQPGSVVSRTLIDKKIGTITLFAFDEGQGLSEHTAPYDAF CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHH VQIVDGVADITIDGQVHRVAAGQMIIMPADRPHALRAVERFKMLLVMIRA HHHHCCHHEEEECCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STGNETLAGRAIGMSELAQYQPGSVVSRTLIDKKIGTITLFAFDEGQGLSEHTAPYDAF CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHH VQIVDGVADITIDGQVHRVAAGQMIIMPADRPHALRAVERFKMLLVMIRA HHHHCCHHEEEECCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA