| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995298
Identifier: 39995298
GI number: 39995298
Start: 201297
End: 201641
Strand: Reverse
Name: 39995298
Synonym: GSU0188
Alternate gene names: NA
Gene position: 201641-201297 (Counterclockwise)
Preceding gene: 39995300
Following gene: 39995297
Centisome position: 5.29
GC content: 60.29
Gene sequence:
>345_bases GTGTCCGGAAAGAAGCTGCACCATGAACACGATAGCGGAATCAATGACCTCCACCAAGAGAGACCTTGTCATCACCCGCA CGCTCCCGAACCACACCGTACCACCCGAGAGCCCGGCACAGCCATGACCTCCCTCCGCCGCAACATCTCCCTGCTCTATG CCTTCTCCTTCCTGCAGATGACCCTGTTCCCCATGGCGGTCATCACGCTCTTCTGGAAGATCGGACAGAGCCTGTCCGAG ATCCTGCTCCTGCAGGGCATCTTCGCCGTGGCCATGGTGGTGATTGAATGCCCCTCCGGCTACTTCAGAGACCGGATCAG CTACCGGCGGAGCAAGGCCCCGTGA
Upstream 100 bases:
>100_bases TGGCTACCAATAAGCCAGCAAAGGCCAGAACCCTCGGGGCGCCCCTGCGCTCTGACAGGCGAACCCGAAGCAATTGAAAT CCTGGCAGGATACTGATTTG
Downstream 100 bases:
>100_bases ACCGGAGGGCGAGAAAGCCGGCTGTCCCGCGTCCCGCGCAGGAAACGGCACGCCGTGCCGTCATCACGCTGATCCGCAAC CACCCCCTCTCGGCCAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Of Facilitator Superfamily
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSGKKLHHEHDSGINDLHQERPCHHPHAPEPHRTTREPGTAMTSLRRNISLLYAFSFLQMTLFPMAVITLFWKIGQSLSE ILLLQGIFAVAMVVIECPSGYFRDRISYRRSKAP
Sequences:
>Translated_114_residues MSGKKLHHEHDSGINDLHQERPCHHPHAPEPHRTTREPGTAMTSLRRNISLLYAFSFLQMTLFPMAVITLFWKIGQSLSE ILLLQGIFAVAMVVIECPSGYFRDRISYRRSKAP >Mature_113_residues SGKKLHHEHDSGINDLHQERPCHHPHAPEPHRTTREPGTAMTSLRRNISLLYAFSFLQMTLFPMAVITLFWKIGQSLSEI LLLQGIFAVAMVVIECPSGYFRDRISYRRSKAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13069; Mature: 12938
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKKLHHEHDSGINDLHQERPCHHPHAPEPHRTTREPGTAMTSLRRNISLLYAFSFLQM CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TLFPMAVITLFWKIGQSLSEILLLQGIFAVAMVVIECPSGYFRDRISYRRSKAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SGKKLHHEHDSGINDLHQERPCHHPHAPEPHRTTREPGTAMTSLRRNISLLYAFSFLQM CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TLFPMAVITLFWKIGQSLSEILLLQGIFAVAMVVIECPSGYFRDRISYRRSKAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA