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The map label for this gene is ygfB [H]

Identifier: 39546357

GI number: 39546357

Start: 3220982

End: 3221560

Strand: Reverse

Name: ygfB [H]

Synonym: STM3059.S

Alternate gene names: 39546357

Gene position: 3221560-3220982 (Counterclockwise)

Preceding gene: 16766363

Following gene: 16766359

Centisome position: 66.32

GC content: 54.06

Gene sequence:

>579_bases
ATGTCTATACAGAACGAAATGCCTGGTTACAACGAAATGAACCGGTTTTTGAATCAACAAGGGGCCGGTCTGACCCCGGC
TGAAATGCATGGTTTAATCAGCGGGATGATTTGCGGCGGCAACAACGACAGCTCATGGCAGCCGCTGTTGCACGACCTGA
CGAACGAAGGTCTGGCCTTCGGGCATGAGCTTGCTCAGGCGCTGCGCAAAATGCACGCGGCGACCAGCGACGCGCTGGAA
GACGACGGCTTTCTTTTTCAGCTTTATCTGCCTGAAGGCGACGATGTCAGCGTATTCGATCGCGCAGATGCCTTAGCCGG
GTGGGTTAACCACTTTTTGCTTGGCCTCGGCGTAACGCAGCCTAAACTTGATAAAGTCACCGGCGAAACGGGTGAAGCGA
TTGACGACCTGCGTAATATTGCGCAGCTTGGTTATGATGAGAGCGAAGATCAGGAAGAGCTGGAGATGTCGCTCGAAGAG
ATCATCGAATATGTCCGTGTTGCGGCGCTGTTATGTCATGACACTTTCACGCGCCAACAGCCGACCGCGCCGGAAGTGCG
TAAACCGACGCTACACTAA

Upstream 100 bases:

>100_bases
CTATAGCTACCCTGGTGTGAAGATACAAGCCCTTTTCTGGTTCACCAGGGTCCAAAGTGGTAGCATATCATGAATATCCT
CCCTTTGATGACGAATGCTT

Downstream 100 bases:

>100_bases
GAAAAAACGAAATGGAGGCCATGTCATGACTCAGCAGGAATACCAACGCCGTCGCCAGGCATTACTGGCGCAAATGCAGC
CCGGCAGCGCCGCGCTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSIQNEMPGYNEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALE
DDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEE
IIEYVRVAALLCHDTFTRQQPTAPEVRKPTLH

Sequences:

>Translated_192_residues
MSIQNEMPGYNEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALE
DDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEE
IIEYVRVAALLCHDTFTRQQPTAPEVRKPTLH
>Mature_191_residues
SIQNEMPGYNEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALED
DGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEEI
IEYVRVAALLCHDTFTRQQPTAPEVRKPTLH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family [H]

Homologues:

Organism=Escherichia coli, GI87082182, Length=192, Percent_Identity=93.2291666666667, Blast_Score=355, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011978 [H]

Pfam domain/function: PF03695 UPF0149 [H]

EC number: NA

Molecular weight: Translated: 21257; Mature: 21126

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQNEMPGYNEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAF
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCHHHH
GHELAQALRKMHAATSDALEDDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEEIIEYVRVAALLCHDTFTRQQ
CHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTAPEVRKPTLH
CCCCCCCCCCCC
>Mature Secondary Structure 
SIQNEMPGYNEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAF
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCHHHH
GHELAQALRKMHAATSDALEDDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEEIIEYVRVAALLCHDTFTRQQ
CHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTAPEVRKPTLH
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]