Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
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Accession | NC_005241 |
Length | 452,156 |
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The map label for this gene is narK2 [H]
Identifier: 38637930
GI number: 38637930
Start: 285762
End: 287156
Strand: Direct
Name: narK2 [H]
Synonym: PHG269
Alternate gene names: 38637930
Gene position: 285762-287156 (Clockwise)
Preceding gene: 38637929
Following gene: 38637931
Centisome position: 63.2
GC content: 66.81
Gene sequence:
>1395_bases ATGTCTACCTCCGTACTCACCCGCTGGGAGCCCGAGAACGCGGCCTTCTGGCAAAGCAAAGGCGAACGCATCGCCTATCG CAACCTCGGGATCTCGATTCCGGCGCTGATGCTGGCTTTCGTGGTCTGGATGCTGTGGAGCGTGGTCGCGGTCAACCTCG ACCGCGCCGGCTTCCAGTTCACCAAGAACCAGCTGTTCTGGCTGACCGCGCTGCCGGCGCTGTCCGGCGCCACGCTGCGC ATCTTCTATTCCTTCCTGGTGCCGGTGTTCGGCGGGCGCCGCTTCACCGCGATCTCCACCGCGCTGCTGCTAATCCCGGC GCTGGGCATGGGCTTTGCGCTGCGCGACCCGTCCACCGGCTACCCGACGCTGCTGGTGCTGGCGCTGCTGTGCGGGCTGG GCGGGGCCAACTTCAGCTCATCGATGGCCAATATCAGCTTCTTCTTCCCCAAGGCGAAGAAGGGGCTGGCCACCGGGCTC AACGCGGGCATCGGCAACCTGGGGGTGTCGGTGGTGCAGTTCGTCACGCCGCTGGTAGTGTCGGTGGCCATCTTCGGCGC GCTTGGCGGCGAGCCGCAGCAATTCCCGGCCAACGAGGCCAACGGCACCACGCAGAGTCTGTGGCTGCAGAACGCCGGCT TCATCTGGGTGCCGTTCATCGTGGTATCGGCGCTGGCGGCGTGGTTCGGCATGCACGATATCGCCGATGCCAAGGCATCG TTCGCCGAACAGGCCGTGATCTTCAAGCGCAAGCACAACTGGCTGATGTGCTGGCTGTACGTGGGCACCTTCGGTTCGTT CATCGGCTTCTCGGCCGGGCTGGCACTGCTGACCAAGTCGCAGTTCCCGGGCGTGAACCCGACCGCCTATGCCTTCCTCG GGCCGCTGGTGGGCGCGCTCACGCGCCCGGTGGGCGGCTGGATCTCGGACAAGCTCGGCGGCGCACGCGTCACGCTGTGG ACCTTCGCCGGCATGATCGCCGCGGTGTTCGCGGTGCTGGCAGCGCTGCCGCATGACGGCGCCGGCGGCAACTTCATGTA CTTCCTGGCGGCCTTCGTCGCGTTGTTCGCGCTGACCGGCATCGGCAACGGCTCGACCTTCCGCATGATCCCGGTGATCT TCCTGACCGAGCGCCAGCGCGCTGCCGCCGGCAAGGGCGACGTGGCGCAGAAGCAGGCCCTGCAGGAAGCCGGCAAGGAA TCCGCCGCCGTGCTGGGCTTCTCCGGTGCGATCGGCGCCTACGGCGGCTTCTTTATCCCCAAGAGCTTCGGCACCTCGCT GGAGCTGACCGGCGCCGCCGACGCCGCGCTGTATTGCTTTATCGCCTTCTACCTCAGCTGCGTGCTGGTGACGTGGTGGC ACTACGCGCGCCGCAACGCGCCCATGCCTTGCTAA
Upstream 100 bases:
>100_bases CAGCCACCGCACCGAACGCCAGCGCAAGGAACAGGCAGTGGGCCTGACCCAGCCGGCCTGACGACCCTTCACATAACGCC ACCAACCAACGCACACCATC
Downstream 100 bases:
>100_bases CAGCCGCCGGCCGGACTAGTTCCATCGAACTAGTCCGCCCTCCGTCACCTAGCCCGACCGGCGTGCGGCGCCTGTTCCAC CAGCGAATTGGCGCCGCCGC
Product: putative nitrite/nitrate transporter
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSTSVLTRWEPENAAFWQSKGERIAYRNLGISIPALMLAFVVWMLWSVVAVNLDRAGFQFTKNQLFWLTALPALSGATLR IFYSFLVPVFGGRRFTAISTALLLIPALGMGFALRDPSTGYPTLLVLALLCGLGGANFSSSMANISFFFPKAKKGLATGL NAGIGNLGVSVVQFVTPLVVSVAIFGALGGEPQQFPANEANGTTQSLWLQNAGFIWVPFIVVSALAAWFGMHDIADAKAS FAEQAVIFKRKHNWLMCWLYVGTFGSFIGFSAGLALLTKSQFPGVNPTAYAFLGPLVGALTRPVGGWISDKLGGARVTLW TFAGMIAAVFAVLAALPHDGAGGNFMYFLAAFVALFALTGIGNGSTFRMIPVIFLTERQRAAAGKGDVAQKQALQEAGKE SAAVLGFSGAIGAYGGFFIPKSFGTSLELTGAADAALYCFIAFYLSCVLVTWWHYARRNAPMPC
Sequences:
>Translated_464_residues MSTSVLTRWEPENAAFWQSKGERIAYRNLGISIPALMLAFVVWMLWSVVAVNLDRAGFQFTKNQLFWLTALPALSGATLR IFYSFLVPVFGGRRFTAISTALLLIPALGMGFALRDPSTGYPTLLVLALLCGLGGANFSSSMANISFFFPKAKKGLATGL NAGIGNLGVSVVQFVTPLVVSVAIFGALGGEPQQFPANEANGTTQSLWLQNAGFIWVPFIVVSALAAWFGMHDIADAKAS FAEQAVIFKRKHNWLMCWLYVGTFGSFIGFSAGLALLTKSQFPGVNPTAYAFLGPLVGALTRPVGGWISDKLGGARVTLW TFAGMIAAVFAVLAALPHDGAGGNFMYFLAAFVALFALTGIGNGSTFRMIPVIFLTERQRAAAGKGDVAQKQALQEAGKE SAAVLGFSGAIGAYGGFFIPKSFGTSLELTGAADAALYCFIAFYLSCVLVTWWHYARRNAPMPC >Mature_463_residues STSVLTRWEPENAAFWQSKGERIAYRNLGISIPALMLAFVVWMLWSVVAVNLDRAGFQFTKNQLFWLTALPALSGATLRI FYSFLVPVFGGRRFTAISTALLLIPALGMGFALRDPSTGYPTLLVLALLCGLGGANFSSSMANISFFFPKAKKGLATGLN AGIGNLGVSVVQFVTPLVVSVAIFGALGGEPQQFPANEANGTTQSLWLQNAGFIWVPFIVVSALAAWFGMHDIADAKASF AEQAVIFKRKHNWLMCWLYVGTFGSFIGFSAGLALLTKSQFPGVNPTAYAFLGPLVGALTRPVGGWISDKLGGARVTLWT FAGMIAAVFAVLAALPHDGAGGNFMYFLAAFVALFALTGIGNGSTFRMIPVIFLTERQRAAAGKGDVAQKQALQEAGKES AAVLGFSGAIGAYGGFFIPKSFGTSLELTGAADAALYCFIAFYLSCVLVTWWHYARRNAPMPC
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=460, Percent_Identity=55.6521739130435, Blast_Score=469, Evalue=1e-133, Organism=Escherichia coli, GI1787743, Length=461, Percent_Identity=54.2299349240781, Blast_Score=425, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49472; Mature: 49341
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSVLTRWEPENAAFWQSKGERIAYRNLGISIPALMLAFVVWMLWSVVAVNLDRAGFQF CCCCCEEEECCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE TKNQLFWLTALPALSGATLRIFYSFLVPVFGGRRFTAISTALLLIPALGMGFALRDPSTG CCCCEEEEEECHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCC YPTLLVLALLCGLGGANFSSSMANISFFFPKAKKGLATGLNAGIGNLGVSVVQFVTPLVV CHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SVAIFGALGGEPQQFPANEANGTTQSLWLQNAGFIWVPFIVVSALAAWFGMHDIADAKAS HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAEQAVIFKRKHNWLMCWLYVGTFGSFIGFSAGLALLTKSQFPGVNPTAYAFLGPLVGAL HHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TRPVGGWISDKLGGARVTLWTFAGMIAAVFAVLAALPHDGAGGNFMYFLAAFVALFALTG HHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC IGNGSTFRMIPVIFLTERQRAAAGKGDVAQKQALQEAGKESAAVLGFSGAIGAYGGFFIP CCCCCCEEEEEEEEEECHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHCCCCEECC KSFGTSLELTGAADAALYCFIAFYLSCVLVTWWHYARRNAPMPC CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STSVLTRWEPENAAFWQSKGERIAYRNLGISIPALMLAFVVWMLWSVVAVNLDRAGFQF CCCCEEEECCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE TKNQLFWLTALPALSGATLRIFYSFLVPVFGGRRFTAISTALLLIPALGMGFALRDPSTG CCCCEEEEEECHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCC YPTLLVLALLCGLGGANFSSSMANISFFFPKAKKGLATGLNAGIGNLGVSVVQFVTPLVV CHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SVAIFGALGGEPQQFPANEANGTTQSLWLQNAGFIWVPFIVVSALAAWFGMHDIADAKAS HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAEQAVIFKRKHNWLMCWLYVGTFGSFIGFSAGLALLTKSQFPGVNPTAYAFLGPLVGAL HHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TRPVGGWISDKLGGARVTLWTFAGMIAAVFAVLAALPHDGAGGNFMYFLAAFVALFALTG HHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC IGNGSTFRMIPVIFLTERQRAAAGKGDVAQKQALQEAGKESAAVLGFSGAIGAYGGFFIP CCCCCCEEEEEEEEEECHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHCCCCEECC KSFGTSLELTGAADAALYCFIAFYLSCVLVTWWHYARRNAPMPC CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]