Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is ubiE [C]

Identifier: 38234722

GI number: 38234722

Start: 2255664

End: 2256398

Strand: Direct

Name: ubiE [C]

Synonym: DIP2179

Alternate gene names: 38234722

Gene position: 2255664-2256398 (Clockwise)

Preceding gene: 38234720

Following gene: 38234724

Centisome position: 90.64

GC content: 58.1

Gene sequence:

>735_bases
ATGCATTTCGCCACTTTGCGCCGATCCCTCCGCCTCCTGCGCAGCTTCAAGTACGAGCAGACGGATCCCGACCGTTTCTA
TTCGTTGCTGGCGCAAGACACTCGGGACCTCGTGGATCATGTGTGCAACAAGGTGGGGATTCAGTATCAGTCGGTTCTCG
ATGTTGGGGGTGGTCCAGGATATTTTGCCGATGCCTTTAGCCCGAAGCGGTATGTGAGCGTGGAGCCGTCGGCAGGCGAG
ATGGCTGCGGCGGGGATCACGGTGGCGCAGGCGGTTCGTGCGTCGGGGTCAGCGCTGCCGTTTCCGGACTCAACTTTTGA
TGTGGTGTTGTCCTCCAATGTGGCGGAGCATGTTCCAGACCCGTGGACGATGGGTGAAGAAATGCTCCGCGTTGTACGCC
CTGGTGGTGTGGTAATTCTAAGCTATACCGTCTGGTTGGGGCCGTTCGGCGGACATGAGACGGGCTTATGGCAGCACTAT
GTTGGTGGTGCGTTTGCCAGAGATCGGTATGCCCGCAAGCATGGGCATCTTCCTAAAAACGTATTCGGTTCTTCGTTGTT
TGCAGTTAGTTGCGCCGAGGGGCTGCGCTGGGGTGTGAGCACTGGCCAGTTGGCGTTGGCGTTTCCGCGTTATCATCCGC
GCTGGGCGTGGTGGCTGGTTCGGGTGCCGGTGCTGCGGGAGTTTTTGGTGAGCAACCTAGTGCTGGTGATACAAAAAGGT
GGCTTCCTTACGTAA

Upstream 100 bases:

>100_bases
TCGCGCCAGCAGAGTAACAAAATCCTCATATCAGCCTCCATCGTAGGCGCTCGCCCCACAACCAGCCCGTTTTTGCAGGG
ATTGTGCCAAGATAAAGGGC

Downstream 100 bases:

>100_bases
GGAAGCCACCTTGGGGGTACTGCTTTAGGATTCAGCTGCTGCTACGCGAGCTTTGAGTGCCTCGAATTGTTCGAGGACCT
CAGCCGGAACCGCGGAGCCC

Product: hypothetical protein

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MHFATLRRSLRLLRSFKYEQTDPDRFYSLLAQDTRDLVDHVCNKVGIQYQSVLDVGGGPGYFADAFSPKRYVSVEPSAGE
MAAAGITVAQAVRASGSALPFPDSTFDVVLSSNVAEHVPDPWTMGEEMLRVVRPGGVVILSYTVWLGPFGGHETGLWQHY
VGGAFARDRYARKHGHLPKNVFGSSLFAVSCAEGLRWGVSTGQLALAFPRYHPRWAWWLVRVPVLREFLVSNLVLVIQKG
GFLT

Sequences:

>Translated_244_residues
MHFATLRRSLRLLRSFKYEQTDPDRFYSLLAQDTRDLVDHVCNKVGIQYQSVLDVGGGPGYFADAFSPKRYVSVEPSAGE
MAAAGITVAQAVRASGSALPFPDSTFDVVLSSNVAEHVPDPWTMGEEMLRVVRPGGVVILSYTVWLGPFGGHETGLWQHY
VGGAFARDRYARKHGHLPKNVFGSSLFAVSCAEGLRWGVSTGQLALAFPRYHPRWAWWLVRVPVLREFLVSNLVLVIQKG
GFLT
>Mature_244_residues
MHFATLRRSLRLLRSFKYEQTDPDRFYSLLAQDTRDLVDHVCNKVGIQYQSVLDVGGGPGYFADAFSPKRYVSVEPSAGE
MAAAGITVAQAVRASGSALPFPDSTFDVVLSSNVAEHVPDPWTMGEEMLRVVRPGGVVILSYTVWLGPFGGHETGLWQHY
VGGAFARDRYARKHGHLPKNVFGSSLFAVSCAEGLRWGVSTGQLALAFPRYHPRWAWWLVRVPVLREFLVSNLVLVIQKG
GFLT

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27026; Mature: 27026

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFATLRRSLRLLRSFKYEQTDPDRFYSLLAQDTRDLVDHVCNKVGIQYQSVLDVGGGPG
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
YFADAFSPKRYVSVEPSAGEMAAAGITVAQAVRASGSALPFPDSTFDVVLSSNVAEHVPD
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCHHHHCCC
PWTMGEEMLRVVRPGGVVILSYTVWLGPFGGHETGLWQHYVGGAFARDRYARKHGHLPKN
CCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHH
VFGSSLFAVSCAEGLRWGVSTGQLALAFPRYHPRWAWWLVRVPVLREFLVSNLVLVIQKG
HHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECC
GFLT
CCCC
>Mature Secondary Structure
MHFATLRRSLRLLRSFKYEQTDPDRFYSLLAQDTRDLVDHVCNKVGIQYQSVLDVGGGPG
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
YFADAFSPKRYVSVEPSAGEMAAAGITVAQAVRASGSALPFPDSTFDVVLSSNVAEHVPD
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCHHHHCCC
PWTMGEEMLRVVRPGGVVILSYTVWLGPFGGHETGLWQHYVGGAFARDRYARKHGHLPKN
CCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHH
VFGSSLFAVSCAEGLRWGVSTGQLALAFPRYHPRWAWWLVRVPVLREFLVSNLVLVIQKG
HHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECC
GFLT
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA