| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234719
Identifier: 38234719
GI number: 38234719
Start: 2252088
End: 2253182
Strand: Direct
Name: 38234719
Synonym: DIP2176
Alternate gene names: NA
Gene position: 2252088-2253182 (Clockwise)
Preceding gene: 38234717
Following gene: 38234720
Centisome position: 90.49
GC content: 57.44
Gene sequence:
>1095_bases ATGAAACCTCGCCTCAGCCCCTCTGGCATTGCGTTTGTTACTGCTGCCGTGTTGTTTATTATGGCGGCCGTCGTTCCGGC GTTGGTGACGGCGCTGCTCAAGCCGATCCCTGTGGGTATTGCGCGTTCTATTACTACCCAGCCGGCGGCGACGGTGATGG TAGATCCTGCGTGTGCGGGGGCGTCGCCACTGTCGTGCCCGCATGTGGAAACGACCACCCAGCTGCGTCGTGAGGTAACA ACGAACAAGACGGAGGTGCGCGATGAGGTGGATTTGCGTGTCGACGAATCCTTGCAGCGCACAGACACCAACGACGCCAT CATTACTATCGACGATTCCCTGCGCCTAATCAGGCACTCCACCTATCCTGTTATCGACTCCACAAGCCACATGAAGGTGA AGTCTCAGGCGTTAAACCTCAACTTTGATACCGGCGATTTCGCCCGCGATGGTTTGCAATACTTCTTCCCCTTCCACACG GAGCGGCGTTCGTATCAGTTCTTTGATCCGATCGCACAAAAGACCTGGCCGTTGGACTATGTGCAGCAAGACAATGGCGA GTATGTGTTCACACAGACCGTCCCTGCGACCAACTTGGTCAAGGCCGCCACGCGTTCTTATACGCAACCGGATGACATCT CCGATGAGCATTCCACGCAGGCACAGACCTCGGATCTTAGCCCTGAGCAGCAAAAGCAGTTGGCCGCAATGCAGGTGACG GATCCTCAAGGCTCGGCGCTGCTCACACCGTACTATACGACGACGCGCACGCTGTGGGTGGAGCCAAAAAGTGGTGTGGT GGTCAACCAAGAAGAAGATGTTTTTATGTTCTACGCGGGTTCACAGCGCGAGGCGGATCGCATTGCGGCTTCCGGCCATG ACGATGAGCTGGCCAAGGAACGCACGATTTTGCACACCTCTTTGAACTGGGATGCGGATACCCAGGCGAATGCTCGTGCG GAGGCCCGCCCGACGGTCGTGGCGTTAAAGGCTGCCCGCGTGGGTGGCTTCTTGGTCAAGATGGTTGGTGTGGCAGCGCT GATCATCGGTGTGCTTTTGGCTTCTCGACGCCGCAGCGAACCCCAATGCCGCTAG
Upstream 100 bases:
>100_bases GGCCCTCTAGCTGGGGCAAGAACTGTGGTGGTTGCGAGGTTAGGTACGATTGAGACACTCCCACGGATTCTAGTCGAAAG TTGAGCACACAAGGGTGAAG
Downstream 100 bases:
>100_bases TCGTCGGCTGGGCAGCGGCTCTTATCACGGCACTTTTGTGGCCGTTTCTGCTGCCCCACGACGGCATGCTGGCGTTGCGG GACATGGTGGTTATCGACCA
Product: putative integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKPRLSPSGIAFVTAAVLFIMAAVVPALVTALLKPIPVGIARSITTQPAATVMVDPACAGASPLSCPHVETTTQLRREVT TNKTEVRDEVDLRVDESLQRTDTNDAIITIDDSLRLIRHSTYPVIDSTSHMKVKSQALNLNFDTGDFARDGLQYFFPFHT ERRSYQFFDPIAQKTWPLDYVQQDNGEYVFTQTVPATNLVKAATRSYTQPDDISDEHSTQAQTSDLSPEQQKQLAAMQVT DPQGSALLTPYYTTTRTLWVEPKSGVVVNQEEDVFMFYAGSQREADRIAASGHDDELAKERTILHTSLNWDADTQANARA EARPTVVALKAARVGGFLVKMVGVAALIIGVLLASRRRSEPQCR
Sequences:
>Translated_364_residues MKPRLSPSGIAFVTAAVLFIMAAVVPALVTALLKPIPVGIARSITTQPAATVMVDPACAGASPLSCPHVETTTQLRREVT TNKTEVRDEVDLRVDESLQRTDTNDAIITIDDSLRLIRHSTYPVIDSTSHMKVKSQALNLNFDTGDFARDGLQYFFPFHT ERRSYQFFDPIAQKTWPLDYVQQDNGEYVFTQTVPATNLVKAATRSYTQPDDISDEHSTQAQTSDLSPEQQKQLAAMQVT DPQGSALLTPYYTTTRTLWVEPKSGVVVNQEEDVFMFYAGSQREADRIAASGHDDELAKERTILHTSLNWDADTQANARA EARPTVVALKAARVGGFLVKMVGVAALIIGVLLASRRRSEPQCR >Mature_364_residues MKPRLSPSGIAFVTAAVLFIMAAVVPALVTALLKPIPVGIARSITTQPAATVMVDPACAGASPLSCPHVETTTQLRREVT TNKTEVRDEVDLRVDESLQRTDTNDAIITIDDSLRLIRHSTYPVIDSTSHMKVKSQALNLNFDTGDFARDGLQYFFPFHT ERRSYQFFDPIAQKTWPLDYVQQDNGEYVFTQTVPATNLVKAATRSYTQPDDISDEHSTQAQTSDLSPEQQKQLAAMQVT DPQGSALLTPYYTTTRTLWVEPKSGVVVNQEEDVFMFYAGSQREADRIAASGHDDELAKERTILHTSLNWDADTQANARA EARPTVVALKAARVGGFLVKMVGVAALIIGVLLASRRRSEPQCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40142; Mature: 40142
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRLSPSGIAFVTAAVLFIMAAVVPALVTALLKPIPVGIARSITTQPAATVMVDPACAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCC ASPLSCPHVETTTQLRREVTTNKTEVRDEVDLRVDESLQRTDTNDAIITIDDSLRLIRHS CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCEECCHHHHCCCCCEEEEECCCHHHHHCC TYPVIDSTSHMKVKSQALNLNFDTGDFARDGLQYFFPFHTERRSYQFFDPIAQKTWPLDY CCCEECCCCCEEEEEEEEEEECCCCHHHHHCHHEECCCCCCCCCCHHHHHHHHHCCCCHH VQQDNGEYVFTQTVPATNLVKAATRSYTQPDDISDEHSTQAQTSDLSPEQQKQLAAMQVT EECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEE DPQGSALLTPYYTTTRTLWVEPKSGVVVNQEEDVFMFYAGSQREADRIAASGHDDELAKE CCCCCEEEEEEEECEEEEEECCCCCEEEECCCCEEEEEECCCCCHHHHHCCCCCHHHHHH RTILHTSLNWDADTQANARAEARPTVVALKAARVGGFLVKMVGVAALIIGVLLASRRRSE HEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PQCR CCCC >Mature Secondary Structure MKPRLSPSGIAFVTAAVLFIMAAVVPALVTALLKPIPVGIARSITTQPAATVMVDPACAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCC ASPLSCPHVETTTQLRREVTTNKTEVRDEVDLRVDESLQRTDTNDAIITIDDSLRLIRHS CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCEECCHHHHCCCCCEEEEECCCHHHHHCC TYPVIDSTSHMKVKSQALNLNFDTGDFARDGLQYFFPFHTERRSYQFFDPIAQKTWPLDY CCCEECCCCCEEEEEEEEEEECCCCHHHHHCHHEECCCCCCCCCCHHHHHHHHHCCCCHH VQQDNGEYVFTQTVPATNLVKAATRSYTQPDDISDEHSTQAQTSDLSPEQQKQLAAMQVT EECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEE DPQGSALLTPYYTTTRTLWVEPKSGVVVNQEEDVFMFYAGSQREADRIAASGHDDELAKE CCCCCEEEEEEEECEEEEEECCCCCEEEECCCCEEEEEECCCCCHHHHHCCCCCHHHHHH RTILHTSLNWDADTQANARAEARPTVVALKAARVGGFLVKMVGVAALIIGVLLASRRRSE HEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PQCR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA