| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234681
Identifier: 38234681
GI number: 38234681
Start: 2195144
End: 2195632
Strand: Direct
Name: 38234681
Synonym: DIP2132
Alternate gene names: NA
Gene position: 2195144-2195632 (Clockwise)
Preceding gene: 38234679
Following gene: 38234682
Centisome position: 88.21
GC content: 61.55
Gene sequence:
>489_bases ATGGCTACACCACTCCACATCGCTGTCATCGGCGCAAACGCCGCCGGACTATACACCGCTGATCTGCTCATGCGCTGCCA CAACAACCACCGCAACATCCACGTCGACATCATCGACCCCGCCCCGGCACCAATAGGAATCAGCCCCTACGCCCAAACAA CCATCACCCACCCGTTGCAATCAGTCACAACATCGACCACCAAAGTCATCGGTGGTGTCACAGTTGACGCCGACATCAGC GCCACTGAACTCAGTTCCCGCTACGCAGCTGTGATCACCCCTGCCACGACCGATCTGGCTATCCAAGCACAAGCAGCCGC CGCGCTCACCGCCTTGCCGCAACCCGCCGTCGATCTGCCTGGCATCCTGCGGAAGCGATCCATCGTCCACACTGAATGGC GCCACAGCCTGCACCTTCCCACAGGTCGCAGCCTCGCCGACTGGCAACAAGCCCTAGCAACTGCCCACGGCGCGCCCGTG TGCTTCTGA
Upstream 100 bases:
>100_bases AGGAGGTGCGAATAAATCACTAGACAGATCGGTACCTATCAGTATAGATTTGGTAGACAATTTAGTCTATAACCGAAATA TGAGCAGAAAGGGTACCTCG
Downstream 100 bases:
>100_bases AATGTCATGGCCACCCTTTAAGGTTAGAAACGACAGTTGTACTGACTTCCTCAAAGGACCGTGATCACTCGCTATGCCAC TGACCATCACCACAGTGCTG
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MATPLHIAVIGANAAGLYTADLLMRCHNNHRNIHVDIIDPAPAPIGISPYAQTTITHPLQSVTTSTTKVIGGVTVDADIS ATELSSRYAAVITPATTDLAIQAQAAAALTALPQPAVDLPGILRKRSIVHTEWRHSLHLPTGRSLADWQQALATAHGAPV CF
Sequences:
>Translated_162_residues MATPLHIAVIGANAAGLYTADLLMRCHNNHRNIHVDIIDPAPAPIGISPYAQTTITHPLQSVTTSTTKVIGGVTVDADIS ATELSSRYAAVITPATTDLAIQAQAAAALTALPQPAVDLPGILRKRSIVHTEWRHSLHLPTGRSLADWQQALATAHGAPV CF >Mature_161_residues ATPLHIAVIGANAAGLYTADLLMRCHNNHRNIHVDIIDPAPAPIGISPYAQTTITHPLQSVTTSTTKVIGGVTVDADISA TELSSRYAAVITPATTDLAIQAQAAAALTALPQPAVDLPGILRKRSIVHTEWRHSLHLPTGRSLADWQQALATAHGAPVC F
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17030; Mature: 16898
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPLHIAVIGANAAGLYTADLLMRCHNNHRNIHVDIIDPAPAPIGISPYAQTTITHPLQ CCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH SVTTSTTKVIGGVTVDADISATELSSRYAAVITPATTDLAIQAQAAAALTALPQPAVDLP HHHCCHHHEECCEEECCCCCHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCC GILRKRSIVHTEWRHSLHLPTGRSLADWQQALATAHGAPVCF HHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATPLHIAVIGANAAGLYTADLLMRCHNNHRNIHVDIIDPAPAPIGISPYAQTTITHPLQ CCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH SVTTSTTKVIGGVTVDADISATELSSRYAAVITPATTDLAIQAQAAAALTALPQPAVDLP HHHCCHHHEECCEEECCCCCHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCC GILRKRSIVHTEWRHSLHLPTGRSLADWQQALATAHGAPVCF HHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA