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The map label for this gene is perM [C]

Identifier: 38234671

GI number: 38234671

Start: 2174439

End: 2175719

Strand: Direct

Name: perM [C]

Synonym: DIP2122

Alternate gene names: 38234671

Gene position: 2174439-2175719 (Clockwise)

Preceding gene: 38234670

Following gene: 38234679

Centisome position: 87.37

GC content: 58.39

Gene sequence:

>1281_bases
TTGACTGAAGCGGTAGAGAGCGCCGACGTAACCCCCTCGGCGCATGTAACAGAGGCTACAGCATACGGCCACCGCGACCG
CGCCGTCATTATTGGCATGGATGCGCGTTGGGCCGCGGGCTGGGCGCTTCGTTTTATTATCGTCGCCATCGCCAGCATCA
TGGCGTGGCGCGGCCTTGGCACCGTTTGGCACGGTGTCCTACCAGTTATTTTGGCAATTTTGCTCTCCACCGTGTTGTGG
CCGCCGGTGCGCTGGCTGCGTTCCAAAAAGGTGCCGCCAGCGCTTGCTGTGGTGATTGTCATTTTGGGCTTCTTCGGCAT
CATCGGAGGCATTTTCGCCGCCATGGCCCCGAGCGTGGGGGCGCAGTCCAAAGACCTTGTCGACCGCGCATCTGATGGCA
TTAACCGGCTACTCGACTGGGCGGAAAACAGCCCCTTCGATATTGATACCTCGCAGATCGACGGCTACTTGAGCAACATT
ACGAACACGCTCAAGGAGCAATCCAGCAACATCGCCAACGGTGTGTTCACTGGTCTTTCTACGGCCTCCACCATCTTGGT
CACCATGATCTTGATGCTGATTCTGTCCTTCTTCTTCCTTAAAGACGGCACCCGCTTCCTCCCCATGGTGCGCCGCCTCA
CCGGCCCGAACGTGGGCTGGCACCTCACCGAGGTTCTTACTCGCATTTGGAACACGTTGGCTGGATTCATCCGCGCCCAG
GCGATCGTTTCGCTTGTCGACGCAGTCCTGATCGGCGTAGGCCTGCTCATCCTCAAGGTACCGCTGGCACTCGTCCTAGC
AGTACTTACTTTCTTCGGTGGCTTCATCCCGATCGTCGGTGCTTTCACCGCTGGTGCTCTCGCCGTGGTCATCGCTTTGG
TCAGCAACGGCATGTCCAACGCCCTGATGGTGCTGGTCCTCATCATCGCAGTCCAGCAAATCGAAGGCCACATCCTGCAA
CCAGTCTTGCAGTCCAAGGCCATGAACTTGCACGCAGCTGTAGTGCTGTTGTCGGTTACGGTGGGCTCTACCCTCTTCGG
TGTGATCGGCGCTTTCTTGGCAGTGCCAGTCGCTGCTACGTTGGCTGTTCTCGTGCGCTACCACTCCGAGCTGGTGGCGC
TTCGGGCTGGCGAAATCACCATCGATGACATGGTCTTGGCTACCGGCGAGGACTCCAGCTCCGACCAACCGTGGGGTTCG
GTAAAGGAGCAACTCAGTAAGTTGAGTCTGCGCAAACCCAACGTGATTGTGCGCAAGCAGGAGGATCCAACGGACGCTTA
G

Upstream 100 bases:

>100_bases
GAACTCTAAAACGCTTCAGTACCTTCCTCTGTGCTGAGCTGTGGCACTATGGGTAGCTATGACATCCCGCGACAGTAATA
AGAAAGATCTCCCCTCAGCG

Downstream 100 bases:

>100_bases
TCCCCCACCAACAAAAAATCCACACCAACCCTCTCGAGAAACCGCGAGTTTTCGAGGGGTGAACTGCTCCCCGTTTTCCG
GACTGGGTTAATTCTAAACG

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTEAVESADVTPSAHVTEATAYGHRDRAVIIGMDARWAAGWALRFIIVAIASIMAWRGLGTVWHGVLPVILAILLSTVLW
PPVRWLRSKKVPPALAVVIVILGFFGIIGGIFAAMAPSVGAQSKDLVDRASDGINRLLDWAENSPFDIDTSQIDGYLSNI
TNTLKEQSSNIANGVFTGLSTASTILVTMILMLILSFFFLKDGTRFLPMVRRLTGPNVGWHLTEVLTRIWNTLAGFIRAQ
AIVSLVDAVLIGVGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGMSNALMVLVLIIAVQQIEGHILQ
PVLQSKAMNLHAAVVLLSVTVGSTLFGVIGAFLAVPVAATLAVLVRYHSELVALRAGEITIDDMVLATGEDSSSDQPWGS
VKEQLSKLSLRKPNVIVRKQEDPTDA

Sequences:

>Translated_426_residues
MTEAVESADVTPSAHVTEATAYGHRDRAVIIGMDARWAAGWALRFIIVAIASIMAWRGLGTVWHGVLPVILAILLSTVLW
PPVRWLRSKKVPPALAVVIVILGFFGIIGGIFAAMAPSVGAQSKDLVDRASDGINRLLDWAENSPFDIDTSQIDGYLSNI
TNTLKEQSSNIANGVFTGLSTASTILVTMILMLILSFFFLKDGTRFLPMVRRLTGPNVGWHLTEVLTRIWNTLAGFIRAQ
AIVSLVDAVLIGVGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGMSNALMVLVLIIAVQQIEGHILQ
PVLQSKAMNLHAAVVLLSVTVGSTLFGVIGAFLAVPVAATLAVLVRYHSELVALRAGEITIDDMVLATGEDSSSDQPWGS
VKEQLSKLSLRKPNVIVRKQEDPTDA
>Mature_425_residues
TEAVESADVTPSAHVTEATAYGHRDRAVIIGMDARWAAGWALRFIIVAIASIMAWRGLGTVWHGVLPVILAILLSTVLWP
PVRWLRSKKVPPALAVVIVILGFFGIIGGIFAAMAPSVGAQSKDLVDRASDGINRLLDWAENSPFDIDTSQIDGYLSNIT
NTLKEQSSNIANGVFTGLSTASTILVTMILMLILSFFFLKDGTRFLPMVRRLTGPNVGWHLTEVLTRIWNTLAGFIRAQA
IVSLVDAVLIGVGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGMSNALMVLVLIIAVQQIEGHILQP
VLQSKAMNLHAAVVLLSVTVGSTLFGVIGAFLAVPVAATLAVLVRYHSELVALRAGEITIDDMVLATGEDSSSDQPWGSV
KEQLSKLSLRKPNVIVRKQEDPTDA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=305, Percent_Identity=28.8524590163934, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI87082271, Length=298, Percent_Identity=23.489932885906, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 45434; Mature: 45303

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAVESADVTPSAHVTEATAYGHRDRAVIIGMDARWAAGWALRFIIVAIASIMAWRGLG
CCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVWHGVLPVILAILLSTVLWPPVRWLRSKKVPPALAVVIVILGFFGIIGGIFAAMAPSVG
HHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AQSKDLVDRASDGINRLLDWAENSPFDIDTSQIDGYLSNITNTLKEQSSNIANGVFTGLS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASTILVTMILMLILSFFFLKDGTRFLPMVRRLTGPNVGWHLTEVLTRIWNTLAGFIRAQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AIVSLVDAVLIGVGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGMSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALMVLVLIIAVQQIEGHILQPVLQSKAMNLHAAVVLLSVTVGSTLFGVIGAFLAVPVAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLVRYHSELVALRAGEITIDDMVLATGEDSSSDQPWGSVKEQLSKLSLRKPNVIVRKQ
HHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECC
EDPTDA
CCCCCC
>Mature Secondary Structure 
TEAVESADVTPSAHVTEATAYGHRDRAVIIGMDARWAAGWALRFIIVAIASIMAWRGLG
CCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVWHGVLPVILAILLSTVLWPPVRWLRSKKVPPALAVVIVILGFFGIIGGIFAAMAPSVG
HHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AQSKDLVDRASDGINRLLDWAENSPFDIDTSQIDGYLSNITNTLKEQSSNIANGVFTGLS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASTILVTMILMLILSFFFLKDGTRFLPMVRRLTGPNVGWHLTEVLTRIWNTLAGFIRAQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AIVSLVDAVLIGVGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGMSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALMVLVLIIAVQQIEGHILQPVLQSKAMNLHAAVVLLSVTVGSTLFGVIGAFLAVPVAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLVRYHSELVALRAGEITIDDMVLATGEDSSSDQPWGSVKEQLSKLSLRKPNVIVRKQ
HHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECC
EDPTDA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]