| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234656
Identifier: 38234656
GI number: 38234656
Start: 2155844
End: 2157412
Strand: Direct
Name: 38234656
Synonym: DIP2107
Alternate gene names: NA
Gene position: 2155844-2157412 (Clockwise)
Preceding gene: 38234655
Following gene: 38234659
Centisome position: 86.63
GC content: 57.93
Gene sequence:
>1569_bases ATGAGCCCCACAAAAACCATCCTGAAGTTCCAATTTCGGCAACGCAACCGAATGATCTCCTCGAATCCCGCGTCGATCAT GATGATCATCTTCATCTGCCTCTACGGATTCATCGGCCTTGCCAGCATGCTCTATAGCGGCTACGACGGCTACCACAAAC AATACTTCGCCGTCGCAGCGATCATCCTTGCCGTCGGAGCACTGGGCTACATCATCTCGGTATCAGTGCTTCCCACTGGC GAAAACCACGTCAACCCCCGCGAGCTGGCCTTCTTCCCCCTAACAGCCCGCAACATCCTGCCTGCCCTGCTCCTTGCCCC GTTGTTGACGTCGATAGGCATGCTCACCATCTTCTTCGCCCTGACCACCGCAGCCCTCGGCGCATGGATCCTACCCACCG GCGCGGCAATCGCATGGGCTCTCGCCGTAGTGATCAACACAGCGCTGACCATCATCATCGGCGAAATAATCCGCTCCGCA CTCGGCACCTCTGGACGCACAAAGAAAGAACGCATCAACATCATCAGCGGATTGGTGATCTTCATAATCATCATCGCCTT CAACACCCTCCAAGGCCTCGACCTCCAAAGCGAACAAATCAACCAAGCCGGACACATACTGATGTGGACCCCACTAGCAG CACCCGCCGGCATCGTCATCGGAATCCTCGAAGGCTCACTCACCACCGCACTAGCCACCGCCGCACTGACCCTCATCTAC CTCACAGGCGCAGTATGGCTATGGCACCGCAACATCACCACTATCCTCAACGAACCTATCGAAAAAGGCTCCACCAGCAC CCGCACCCGCTCATCACGCGTACTCGTCCCGTGGGCACCAGCCACCCCGACCGGATACATCTACTCCCGAGCACTGCGCT ACATCCGCCGCGATAGTCGCATGATCAGCCAACTGATTATGACCCCCATCTTGATGGTCTTTCTCACCTACAAGGCGATC GTCGATTCCCCCTGGGCCTTAGTCTTTCTCGTCGCGATGACAGCACTCCTCGCTGGTATGGCCGCCTCCAACGACTTCGG CTACGACGGCCCCAGCAACTGGAGCATCATCGTCGCAGGCGTTCCCGCCAAAAACTGGGTACTAGCCCGTCACGCAGCCT CGCTGACAATCCAAAGCAGCACGGTTCTCATCTCTTGGATCCTCCTGCTCGTACTCTTCCCCGACAAAGGCATTGCCATG GCCGTCTGCGTAAGCTCCCTAGGCGCACTCATGGGATCCGCCGCCATCGGATTAGCCTTTACCGTATTCAACCCCTTCCC CACCGCCGCACCAGGTGTTAATGCCTTCGCTGACCGCTCCGGATACAGCGCCGCCGCATTCCTCACCGGATTCGGTTCCA TGCTGCTTGTGTGGATCCCTATCCTGCCAGGTGCTGCACTGCTCATCTATGGGTTCAGCAGCAGTGCCGCGCTACCGATC GTGGCCGGCTGCGCACTGTGCATTCTCATACCCGGCGCGATCTACTACCTCGTGATTCGCAAGGCGGTGGCGCGGGTTGA GCGTGCTACACCGGAGATCTTTAACAAGGTGAATAAGTTCGTCGGCTAA
Upstream 100 bases:
>100_bases GAGGTTCGCGGCACGGGCACCTTGGTAGACAAATTCGTAGAACTCGTCGGCAGCACCCAGCTTGACGACGACAGCTTCGG CTGGTTAGGCGGCAAATAAC
Downstream 100 bases:
>100_bases GGTTCCCGTAGCTTGTGACTCCGACCCCTGTGAGATACAAAATCGCTCCGGTTGGCTGGGATTGGCTGGCGCTGGTGGGC GTTGATGGGTGCTGGTGGGC
Product: putative integral membrane transport protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC-Type Transport System Permease Component
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MSPTKTILKFQFRQRNRMISSNPASIMMIIFICLYGFIGLASMLYSGYDGYHKQYFAVAAIILAVGALGYIISVSVLPTG ENHVNPRELAFFPLTARNILPALLLAPLLTSIGMLTIFFALTTAALGAWILPTGAAIAWALAVVINTALTIIIGEIIRSA LGTSGRTKKERINIISGLVIFIIIIAFNTLQGLDLQSEQINQAGHILMWTPLAAPAGIVIGILEGSLTTALATAALTLIY LTGAVWLWHRNITTILNEPIEKGSTSTRTRSSRVLVPWAPATPTGYIYSRALRYIRRDSRMISQLIMTPILMVFLTYKAI VDSPWALVFLVAMTALLAGMAASNDFGYDGPSNWSIIVAGVPAKNWVLARHAASLTIQSSTVLISWILLLVLFPDKGIAM AVCVSSLGALMGSAAIGLAFTVFNPFPTAAPGVNAFADRSGYSAAAFLTGFGSMLLVWIPILPGAALLIYGFSSSAALPI VAGCALCILIPGAIYYLVIRKAVARVERATPEIFNKVNKFVG
Sequences:
>Translated_522_residues MSPTKTILKFQFRQRNRMISSNPASIMMIIFICLYGFIGLASMLYSGYDGYHKQYFAVAAIILAVGALGYIISVSVLPTG ENHVNPRELAFFPLTARNILPALLLAPLLTSIGMLTIFFALTTAALGAWILPTGAAIAWALAVVINTALTIIIGEIIRSA LGTSGRTKKERINIISGLVIFIIIIAFNTLQGLDLQSEQINQAGHILMWTPLAAPAGIVIGILEGSLTTALATAALTLIY LTGAVWLWHRNITTILNEPIEKGSTSTRTRSSRVLVPWAPATPTGYIYSRALRYIRRDSRMISQLIMTPILMVFLTYKAI VDSPWALVFLVAMTALLAGMAASNDFGYDGPSNWSIIVAGVPAKNWVLARHAASLTIQSSTVLISWILLLVLFPDKGIAM AVCVSSLGALMGSAAIGLAFTVFNPFPTAAPGVNAFADRSGYSAAAFLTGFGSMLLVWIPILPGAALLIYGFSSSAALPI VAGCALCILIPGAIYYLVIRKAVARVERATPEIFNKVNKFVG >Mature_521_residues SPTKTILKFQFRQRNRMISSNPASIMMIIFICLYGFIGLASMLYSGYDGYHKQYFAVAAIILAVGALGYIISVSVLPTGE NHVNPRELAFFPLTARNILPALLLAPLLTSIGMLTIFFALTTAALGAWILPTGAAIAWALAVVINTALTIIIGEIIRSAL GTSGRTKKERINIISGLVIFIIIIAFNTLQGLDLQSEQINQAGHILMWTPLAAPAGIVIGILEGSLTTALATAALTLIYL TGAVWLWHRNITTILNEPIEKGSTSTRTRSSRVLVPWAPATPTGYIYSRALRYIRRDSRMISQLIMTPILMVFLTYKAIV DSPWALVFLVAMTALLAGMAASNDFGYDGPSNWSIIVAGVPAKNWVLARHAASLTIQSSTVLISWILLLVLFPDKGIAMA VCVSSLGALMGSAAIGLAFTVFNPFPTAAPGVNAFADRSGYSAAAFLTGFGSMLLVWIPILPGAALLIYGFSSSAALPIV AGCALCILIPGAIYYLVIRKAVARVERATPEIFNKVNKFVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55871; Mature: 55740
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTKTILKFQFRQRNRMISSNPASIMMIIFICLYGFIGLASMLYSGYDGYHKQYFAVAA CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IILAVGALGYIISVSVLPTGENHVNPRELAFFPLTARNILPALLLAPLLTSIGMLTIFFA HHHHHHHHHHHHEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LTTAALGAWILPTGAAIAWALAVVINTALTIIIGEIIRSALGTSGRTKKERINIISGLVI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH FIIIIAFNTLQGLDLQSEQINQAGHILMWTPLAAPAGIVIGILEGSLTTALATAALTLIY HHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHH LTGAVWLWHRNITTILNEPIEKGSTSTRTRSSRVLVPWAPATPTGYIYSRALRYIRRDSR HHHHHHHHHCCHHHHHCCHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH MISQLIMTPILMVFLTYKAIVDSPWALVFLVAMTALLAGMAASNDFGYDGPSNWSIIVAG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE VPAKNWVLARHAASLTIQSSTVLISWILLLVLFPDKGIAMAVCVSSLGALMGSAAIGLAF CCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHE TVFNPFPTAAPGVNAFADRSGYSAAAFLTGFGSMLLVWIPILPGAALLIYGFSSSAALPI EEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH VAGCALCILIPGAIYYLVIRKAVARVERATPEIFNKVNKFVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SPTKTILKFQFRQRNRMISSNPASIMMIIFICLYGFIGLASMLYSGYDGYHKQYFAVAA CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IILAVGALGYIISVSVLPTGENHVNPRELAFFPLTARNILPALLLAPLLTSIGMLTIFFA HHHHHHHHHHHHEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LTTAALGAWILPTGAAIAWALAVVINTALTIIIGEIIRSALGTSGRTKKERINIISGLVI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH FIIIIAFNTLQGLDLQSEQINQAGHILMWTPLAAPAGIVIGILEGSLTTALATAALTLIY HHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHH LTGAVWLWHRNITTILNEPIEKGSTSTRTRSSRVLVPWAPATPTGYIYSRALRYIRRDSR HHHHHHHHHCCHHHHHCCHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH MISQLIMTPILMVFLTYKAIVDSPWALVFLVAMTALLAGMAASNDFGYDGPSNWSIIVAG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE VPAKNWVLARHAASLTIQSSTVLISWILLLVLFPDKGIAMAVCVSSLGALMGSAAIGLAF CCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHE TVFNPFPTAAPGVNAFADRSGYSAAAFLTGFGSMLLVWIPILPGAALLIYGFSSSAALPI EEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH VAGCALCILIPGAIYYLVIRKAVARVERATPEIFNKVNKFVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA