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The map label for this gene is clpB2 [H]

Identifier: 38234650

GI number: 38234650

Start: 2150689

End: 2150889

Strand: Reverse

Name: clpB2 [H]

Synonym: DIP2101

Alternate gene names: 38234650

Gene position: 2150889-2150689 (Counterclockwise)

Preceding gene: 38234651

Following gene: 38234649

Centisome position: 86.43

GC content: 52.74

Gene sequence:

>201_bases
GTGTTGATCTTTGATCCGCTGAGCCAAGAGCAGCTCACACACATTGTGGAGATTCAGATTGCGCAGCTGGCACAGCGTCT
TGCCGCTCGTTGTTTGATCCAGCAGGCTAAGAAGCTGTTGCCTGGTGAGATTCGCGATGGTAGCGAGGTTCATGTGGACG
TTGCCGATGGCGGCGAAAACTTAGATATTAGTGCCAGCTAG

Upstream 100 bases:

>100_bases
TATTGCAAATTTTTCGTTTCTTAAAGTTGTAAGTTTGTTTGGTTATCTGTGATTATTTAGTGAACTGTATTGAGGTTTTG
AGTTAAACGTTATTTATGAT

Downstream 100 bases:

>100_bases
GTAGGGCAAAGTAGCAGGTAAGGCAGTCCTTGGGTTTGCACCAAACGTTGGGGCTTCAGTTGGTAAGTAGGGAGTCAGAA
ACCTTCCTTCATTGCATCGG

Product: putative heat shock protein (partial)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MLIFDPLSQEQLTHIVEIQIAQLAQRLAARCLIQQAKKLLPGEIRDGSEVHVDVADGGENLDISAS

Sequences:

>Translated_66_residues
MLIFDPLSQEQLTHIVEIQIAQLAQRLAARCLIQQAKKLLPGEIRDGSEVHVDVADGGENLDISAS
>Mature_66_residues
MLIFDPLSQEQLTHIVEIQIAQLAQRLAARCLIQQAKKLLPGEIRDGSEVHVDVADGGENLDISAS

Specific function: Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR018368
- InterPro:   IPR017730
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR004176
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF02861 Clp_N; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 7207; Mature: 7207

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIFDPLSQEQLTHIVEIQIAQLAQRLAARCLIQQAKKLLPGEIRDGSEVHVDVADGGEN
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
LDISAS
EEEECC
>Mature Secondary Structure
MLIFDPLSQEQLTHIVEIQIAQLAQRLAARCLIQQAKKLLPGEIRDGSEVHVDVADGGEN
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
LDISAS
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910 [H]