| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38234579
Identifier: 38234579
GI number: 38234579
Start: 2069482
End: 2070753
Strand: Direct
Name: 38234579
Synonym: DIP2015
Alternate gene names: NA
Gene position: 2069482-2070753 (Clockwise)
Preceding gene: 38234578
Following gene: 38234587
Centisome position: 83.16
GC content: 50.86
Gene sequence:
>1272_bases ATGATGAGAAAGCACTTTCTTTCACGAAGCAGCCTTCGTGCTATCGTACTTTGTGTTTCCTTAGGCACGCTGTCCGCCCA AGCTGTCTCTGTTCCCAACGCAATCGCCCAGTCTTCGTTACCAGCGTCTCCACTAGATAGTTTCTATTCTTCGATCCCCT CGGGTGAGAACACAGTAGCCGGTACCGTTCTAAGTGAACAGGTGATCCCTACTGGTCTATTGGATGCCACTATTAAAGTA AAGCGCATCGCATACTCATCTACGCATCCAAGCGGACGGATGGTGCCTACAATCGCAACAATCCTTACCCCTACAGCGCC TTGGACTGGTTCAGGTCCTCGTCCTGCTGCATTGCTTGCCCCTGGAACACAGGGCGCTGGCGATCAATGCGCGCCTTCAA AGTTGATTACCGTAGGCGCCGAGTATGAACTGTTCCCAGCGATCATGTTATTGCGTAGAGGCTGGACGGTTGCAATTACG GATTATCAAGGGCTGGGTACAATCGGGGCTCATACTTATATGAACAGGAAGGCGCAGGGGGCAGCCTTATTGGACTTAGG TCGCGCAGTCGTGAATGTGAAGTACCCTGAGGTGCGTAAAGACGCTCCACTTATCTTATGGGGATATTCGCAAGGCGGTG GTGCTTCGGCGGCTGCTGCAGAAATGCACGCGTCATACGCACCGGATGTAAATATTCGTGGAGGTTTTGCAGGAGGTGTT CCTGCAGAATTGCTGGCCACAGCGCGTTCTTTGGAAGGCTCACCTTTACTGGGAGCGTTGGGATACGCGATTTCTGGTAT GTACGAAACCCATCCAGAGTTACGCCTAGAAGTTGACGATCTTCTCAATGATCGTGGCAAACAGTGGATCATTGACAGCG GAACGCACTGCTTGCTGGATTCATTCCGTACAATGCCCATTCCAGATTCTCGCGTTATGACCCGCTCTGGGCAGCGTCTC ACTGACCTTTTGGGATCTAAAGTATTCCATTCATATTTCGAAGAGCAACGCTTAGGAAAAGTTGCACCTGATGTTCCTAT GTTTGTTTCTCAAGGTGCTAACGATGACATCATCCCTGCACAACAAGCTCGCGACATGGTAAGTAATTGGCGTGATCTGG GAGCAGACGTGACTTACTTTGAAGATCCAGCGCCCTTGTTGGTACGCATGGAAGGACATGTTCGCCCCTTGGTCACGTCC TTCGATCCTGCACTTCAATGGGCGGAAAAACTTCTAGGTTCGGAGGTTATTAATCCACCGAGTGCATCCTAG
Upstream 100 bases:
>100_bases CATATAAAACAGAATCGAGCCAACTTTGTACTATAGGTGCACGAGCGATCATCGTTTCAACCGTGCACAGCTTTAGTAAT TTTTGATTGGATAATTTCAC
Downstream 100 bases:
>100_bases TAGTCCATAGGTGAGCTTAATCTCCAATGCGATCTCTACCGCGCATAACAATTAAGGGATCGGGCTCACCTACTAGATCG TGGTCCTTGTTTGAGTACTC
Product: putative exported lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MMRKHFLSRSSLRAIVLCVSLGTLSAQAVSVPNAIAQSSLPASPLDSFYSSIPSGENTVAGTVLSEQVIPTGLLDATIKV KRIAYSSTHPSGRMVPTIATILTPTAPWTGSGPRPAALLAPGTQGAGDQCAPSKLITVGAEYELFPAIMLLRRGWTVAIT DYQGLGTIGAHTYMNRKAQGAALLDLGRAVVNVKYPEVRKDAPLILWGYSQGGGASAAAAEMHASYAPDVNIRGGFAGGV PAELLATARSLEGSPLLGALGYAISGMYETHPELRLEVDDLLNDRGKQWIIDSGTHCLLDSFRTMPIPDSRVMTRSGQRL TDLLGSKVFHSYFEEQRLGKVAPDVPMFVSQGANDDIIPAQQARDMVSNWRDLGADVTYFEDPAPLLVRMEGHVRPLVTS FDPALQWAEKLLGSEVINPPSAS
Sequences:
>Translated_423_residues MMRKHFLSRSSLRAIVLCVSLGTLSAQAVSVPNAIAQSSLPASPLDSFYSSIPSGENTVAGTVLSEQVIPTGLLDATIKV KRIAYSSTHPSGRMVPTIATILTPTAPWTGSGPRPAALLAPGTQGAGDQCAPSKLITVGAEYELFPAIMLLRRGWTVAIT DYQGLGTIGAHTYMNRKAQGAALLDLGRAVVNVKYPEVRKDAPLILWGYSQGGGASAAAAEMHASYAPDVNIRGGFAGGV PAELLATARSLEGSPLLGALGYAISGMYETHPELRLEVDDLLNDRGKQWIIDSGTHCLLDSFRTMPIPDSRVMTRSGQRL TDLLGSKVFHSYFEEQRLGKVAPDVPMFVSQGANDDIIPAQQARDMVSNWRDLGADVTYFEDPAPLLVRMEGHVRPLVTS FDPALQWAEKLLGSEVINPPSAS >Mature_423_residues MMRKHFLSRSSLRAIVLCVSLGTLSAQAVSVPNAIAQSSLPASPLDSFYSSIPSGENTVAGTVLSEQVIPTGLLDATIKV KRIAYSSTHPSGRMVPTIATILTPTAPWTGSGPRPAALLAPGTQGAGDQCAPSKLITVGAEYELFPAIMLLRRGWTVAIT DYQGLGTIGAHTYMNRKAQGAALLDLGRAVVNVKYPEVRKDAPLILWGYSQGGGASAAAAEMHASYAPDVNIRGGFAGGV PAELLATARSLEGSPLLGALGYAISGMYETHPELRLEVDDLLNDRGKQWIIDSGTHCLLDSFRTMPIPDSRVMTRSGQRL TDLLGSKVFHSYFEEQRLGKVAPDVPMFVSQGANDDIIPAQQARDMVSNWRDLGADVTYFEDPAPLLVRMEGHVRPLVTS FDPALQWAEKLLGSEVINPPSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005152 [H]
Pfam domain/function: PF03583 LIP [H]
EC number: NA
Molecular weight: Translated: 45106; Mature: 45106
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKHFLSRSSLRAIVLCVSLGTLSAQAVSVPNAIAQSSLPASPLDSFYSSIPSGENTVA CCHHHHHCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCCCEE GTVLSEQVIPTGLLDATIKVKRIAYSSTHPSGRMVPTIATILTPTAPWTGSGPRPAALLA HHHHHHHHCCCCHHHHHEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEC PGTQGAGDQCAPSKLITVGAEYELFPAIMLLRRGWTVAITDYQGLGTIGAHTYMNRKAQG CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCC AALLDLGRAVVNVKYPEVRKDAPLILWGYSQGGGASAAAAEMHASYAPDVNIRGGFAGGV HHHHHHCHHHEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PAELLATARSLEGSPLLGALGYAISGMYETHPELRLEVDDLLNDRGKQWIIDSGTHCLLD HHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCEEEEHHHHHCCCCCEEEECCCCHHHHH SFRTMPIPDSRVMTRSGQRLTDLLGSKVFHSYFEEQRLGKVAPDVPMFVSQGANDDIIPA CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCH QQARDMVSNWRDLGADVTYFEDPAPLLVRMEGHVRPLVTSFDPALQWAEKLLGSEVINPP HHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCC SAS CCC >Mature Secondary Structure MMRKHFLSRSSLRAIVLCVSLGTLSAQAVSVPNAIAQSSLPASPLDSFYSSIPSGENTVA CCHHHHHCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCCCEE GTVLSEQVIPTGLLDATIKVKRIAYSSTHPSGRMVPTIATILTPTAPWTGSGPRPAALLA HHHHHHHHCCCCHHHHHEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEC PGTQGAGDQCAPSKLITVGAEYELFPAIMLLRRGWTVAITDYQGLGTIGAHTYMNRKAQG CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCC AALLDLGRAVVNVKYPEVRKDAPLILWGYSQGGGASAAAAEMHASYAPDVNIRGGFAGGV HHHHHHCHHHEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PAELLATARSLEGSPLLGALGYAISGMYETHPELRLEVDDLLNDRGKQWIIDSGTHCLLD HHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCEEEEHHHHHCCCCCEEEECCCCHHHHH SFRTMPIPDSRVMTRSGQRLTDLLGSKVFHSYFEEQRLGKVAPDVPMFVSQGANDDIIPA CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCH QQARDMVSNWRDLGADVTYFEDPAPLLVRMEGHVRPLVTSFDPALQWAEKLLGSEVINPP HHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCC SAS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]