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The map label for this gene is nagD [H]

Identifier: 38234264

GI number: 38234264

Start: 1731758

End: 1732567

Strand: Direct

Name: nagD [H]

Synonym: DIP1693

Alternate gene names: 38234264

Gene position: 1731758-1732567 (Clockwise)

Preceding gene: 38234263

Following gene: 38234268

Centisome position: 69.59

GC content: 51.85

Gene sequence:

>810_bases
ATGACAGTTTCTTACCTTAGCGACATGGATGGTGTCCTCATCAAAGAGGGCGACATGATTCCTGGTGCCGATGTCTTTTT
AAAACGCCTCAAAGATAACGACATCAACTTCATGGTGTTAACCAATAACTCGATCCACACCCCACGAGATCTATCTGCTC
GCTTGCGCGCTACCGGACTCGACATCCCCGAAGACCGCATTTGGACATCGGCCAAGGCGACAGCAACATTTTTAGCGCAA
CAAACGAAGCACGGAACTGCCTATGCCGTAGGAGAATCTGGGTTAACCACAGAGTTACATGAATCCGGTTGGATTTTGAC
CGACTCTTCCCCTGACTTCGTTGTATTAGGCGAAACCCGTACGTATTCTTTCGAAGCAATCACTACAGCCATCAATCTCA
TTCGTGAGGGTGCTCGTTTCATCTGCACTAACCCAGACGTCACAGGCCCTGCCCCCAAAGGAATTTTGCCTGCGACGGGT
GCTGTAGCTCAGTTGATTACCGCAGCGACCGGTAAGAACCCTTACTTTGTGGGTAAACCAAACCCCGTGATGATGCGTAC
CGCATTGAACAATATCAAGGCTCACTCAGAATCAACGGTGATGATTGGTGACCGCATGGACACGGATGTGCGCTGCGGAC
TTGAAGCCGGTATGCGCACTATTTTGGTACGCTCCGGCATCTCCGACGACGCTGAAGTAGACAAGTATCCGTTCCGTCCA
ACGCGCATCGTCAACTCGATCGCCGACCTAGCGGATTGCATCCTCGATCCCTTCGGCGACGGCCATTACGCCGACTCCGA
ACCGCGTTAA

Upstream 100 bases:

>100_bases
TCACGACGCCGACGTGTTTCCGGCTCGTACGGTGCATGACTTGATGCAATTGATTGATCAATAAACCAATAGTTCCTCGA
AGAAAGGAAGCGAACTCCGC

Downstream 100 bases:

>100_bases
ACAAACTCTACGCATGCGCTAAAACCTTGGGTAGCTGCCAACGCAGCTACTTCTTGGCTCAGCACGCGAAGCTCATCCAA
CGTCCCGTTGAGCACCTGAC

Product: putative N-acetylglucosamine-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTVSYLSDMDGVLIKEGDMIPGADVFLKRLKDNDINFMVLTNNSIHTPRDLSARLRATGLDIPEDRIWTSAKATATFLAQ
QTKHGTAYAVGESGLTTELHESGWILTDSSPDFVVLGETRTYSFEAITTAINLIREGARFICTNPDVTGPAPKGILPATG
AVAQLITAATGKNPYFVGKPNPVMMRTALNNIKAHSESTVMIGDRMDTDVRCGLEAGMRTILVRSGISDDAEVDKYPFRP
TRIVNSIADLADCILDPFGDGHYADSEPR

Sequences:

>Translated_269_residues
MTVSYLSDMDGVLIKEGDMIPGADVFLKRLKDNDINFMVLTNNSIHTPRDLSARLRATGLDIPEDRIWTSAKATATFLAQ
QTKHGTAYAVGESGLTTELHESGWILTDSSPDFVVLGETRTYSFEAITTAINLIREGARFICTNPDVTGPAPKGILPATG
AVAQLITAATGKNPYFVGKPNPVMMRTALNNIKAHSESTVMIGDRMDTDVRCGLEAGMRTILVRSGISDDAEVDKYPFRP
TRIVNSIADLADCILDPFGDGHYADSEPR
>Mature_268_residues
TVSYLSDMDGVLIKEGDMIPGADVFLKRLKDNDINFMVLTNNSIHTPRDLSARLRATGLDIPEDRIWTSAKATATFLAQQ
TKHGTAYAVGESGLTTELHESGWILTDSSPDFVVLGETRTYSFEAITTAINLIREGARFICTNPDVTGPAPKGILPATGA
VAQLITAATGKNPYFVGKPNPVMMRTALNNIKAHSESTVMIGDRMDTDVRCGLEAGMRTILVRSGISDDAEVDKYPFRPT
RIVNSIADLADCILDPFGDGHYADSEPR

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10092677, Length=274, Percent_Identity=28.8321167883212, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI108796653, Length=286, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI14149777, Length=239, Percent_Identity=28.4518828451883, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI269847098, Length=231, Percent_Identity=24.2424242424242, Blast_Score=71, Evalue=9e-13,
Organism=Escherichia coli, GI1786890, Length=245, Percent_Identity=43.265306122449, Blast_Score=216, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17558880, Length=257, Percent_Identity=29.1828793774319, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17562458, Length=257, Percent_Identity=29.1828793774319, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17560956, Length=257, Percent_Identity=29.1828793774319, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193210059, Length=254, Percent_Identity=27.1653543307087, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI86563050, Length=245, Percent_Identity=27.7551020408163, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71984613, Length=260, Percent_Identity=25.3846153846154, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562356, Length=258, Percent_Identity=26.3565891472868, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6319965, Length=236, Percent_Identity=26.271186440678, Blast_Score=83, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24666141, Length=255, Percent_Identity=28.6274509803922, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24656326, Length=256, Percent_Identity=26.953125, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24666137, Length=286, Percent_Identity=27.6223776223776, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24656330, Length=244, Percent_Identity=25.4098360655738, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19920940, Length=254, Percent_Identity=25.9842519685039, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29166; Mature: 29035

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSYLSDMDGVLIKEGDMIPGADVFLKRLKDNDINFMVLTNNSIHTPRDLSARLRATGL
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCC
DIPEDRIWTSAKATATFLAQQTKHGTAYAVGESGLTTELHESGWILTDSSPDFVVLGETR
CCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEHHCCCEEEECCCCCEEEEECCC
TYSFEAITTAINLIREGARFICTNPDVTGPAPKGILPATGAVAQLITAATGKNPYFVGKP
EEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCC
NPVMMRTALNNIKAHSESTVMIGDRMDTDVRCGLEAGMRTILVRSGISDDAEVDKYPFRP
CCEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCH
TRIVNSIADLADCILDPFGDGHYADSEPR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVSYLSDMDGVLIKEGDMIPGADVFLKRLKDNDINFMVLTNNSIHTPRDLSARLRATGL
CCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCC
DIPEDRIWTSAKATATFLAQQTKHGTAYAVGESGLTTELHESGWILTDSSPDFVVLGETR
CCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEHHCCCEEEECCCCCEEEEECCC
TYSFEAITTAINLIREGARFICTNPDVTGPAPKGILPATGAVAQLITAATGKNPYFVGKP
EEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCC
NPVMMRTALNNIKAHSESTVMIGDRMDTDVRCGLEAGMRTILVRSGISDDAEVDKYPFRP
CCEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCH
TRIVNSIADLADCILDPFGDGHYADSEPR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]