| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is ilvA [H]
Identifier: 38234154
GI number: 38234154
Start: 1604995
End: 1606335
Strand: Reverse
Name: ilvA [H]
Synonym: DIP1579
Alternate gene names: 38234154
Gene position: 1606335-1604995 (Counterclockwise)
Preceding gene: 38234155
Following gene: 38234153
Centisome position: 64.55
GC content: 52.05
Gene sequence:
>1341_bases GTGTTAGGAAGCAGTAGTACCCCGTGGTTAAAATTGTTGCCCATGAGTAAAGAAGCAGAAAACCAGCAGGTCACTTTCGG CGCAATTCACGCCGCTGATATTCAAATGGCACAGTCTCGAATTTCTGCTTCTATTGCACCGACGCCCCTGCAGCATTGCC CACGGTTGTCGCAAATGACGGGATGCGAAGTCTATCTCAAGCGCGAAGACCTTCAAGACGTTCGGTCCTATAAAATCCGT GGTGCTGTCAATGCGATCTCGCAACTGACAGAGGAACAACGAGTGGCTGGGATCGTGGCGGCGTCGGCAGGCAATCATGC TCAAGGTGTGGCTTTCGCCTGCCGAACCATGGGTATCAAAGGTCGAATCTACGTTCCGGCAGCAACGCCAAAGCAAAAAC GCGACCGTATCATGGTCCATGGTGGCGACGCTGTAGAACTCGTAGTCACCGGTGCCAATTTTGATGAAGCGGCAGCTGCT GCACGTGAGTACGCTCGCGTTGAAGGCGCAACGATGGTGGAACCATTCGATAACCGCGATACCGTTATCGGCCAAGGAAC TGTAGCAGCAGAGATCTTGGCACAATTAACAACGCTGGGTAAAACACTTGATACCGTCGTCGTGCCCGTTGGTGGTGGTG GATTGCTTTCCGGCGTTGTCAGCTATCTTGCTGATATGGCGCCACGCACCGCGATCGTTGGAGTAGAACCAGAAGGTGCG GCATCCATGCGCGCCGCTCTGGATGCGCACGGTCCTGTGACCTTGGATAATGTTGACCCATTTGTCGACGGTGCCGCTGT GAAACGTATCGGTGATCTTAACTATCACATCATCGAACACAACCAAGGCCGTATTCACCCCATCAGCGTTAATGAAGGTG CTGTATGTACTGAGATGCTTGACTTGTATCAAAACGAGGGCATCATTACAGAACCTGCAGGGGCGCTGTCAGTTACTGGA TTGAAAGAGCTGTCACTTGGAAGCAGGGACGTAGTTGTCTGCATCATCTCTGGTGGTAACAACGATGTGCTGCGTTATGG GGAAATCATGGAGCGCTCCCTCGTTCATCGCGGACTCAAGCACTACTTCCTCGTCAATTTCCCACAGGAGCCAGGGCAGC TACGTACTTTCCTGAACGACATCTTGGGCCCAGATGACGACATCACTTTGTTTGAATATCTCAAACGCAACAACCGTGAA ACCGGAACAGCGCTCGTAGGACTTCAACTCGGAGTTGCTTCCGAACTTGACGGTTTGCTCGAGCGAATGAATGCTTCGCG GATTGATTGCCGGCGACTAGAACCTGGAACGCCAGAGTATAGTTACCTCGTTAATTTGTAA
Upstream 100 bases:
>100_bases AAAAACAGTGATGATTTTGGGCGAACACCTCCGAGTTAATCGCAGTGGAAATCTCATGGGTGACCTGAAAGCCACCATGG GGCCGGGCATTTTGGGGTAG
Downstream 100 bases:
>100_bases CGACTCGGACGAAAAGGAGAGCGGTGGACCTCTACCGTAGGCCTGTTGCCCACGAGGAATTTCGCAACGAAATCGAGATT AAACGGTCACGATTCATCAC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MLGSSSTPWLKLLPMSKEAENQQVTFGAIHAADIQMAQSRISASIAPTPLQHCPRLSQMTGCEVYLKREDLQDVRSYKIR GAVNAISQLTEEQRVAGIVAASAGNHAQGVAFACRTMGIKGRIYVPAATPKQKRDRIMVHGGDAVELVVTGANFDEAAAA AREYARVEGATMVEPFDNRDTVIGQGTVAAEILAQLTTLGKTLDTVVVPVGGGGLLSGVVSYLADMAPRTAIVGVEPEGA ASMRAALDAHGPVTLDNVDPFVDGAAVKRIGDLNYHIIEHNQGRIHPISVNEGAVCTEMLDLYQNEGIITEPAGALSVTG LKELSLGSRDVVVCIISGGNNDVLRYGEIMERSLVHRGLKHYFLVNFPQEPGQLRTFLNDILGPDDDITLFEYLKRNNRE TGTALVGLQLGVASELDGLLERMNASRIDCRRLEPGTPEYSYLVNL
Sequences:
>Translated_446_residues MLGSSSTPWLKLLPMSKEAENQQVTFGAIHAADIQMAQSRISASIAPTPLQHCPRLSQMTGCEVYLKREDLQDVRSYKIR GAVNAISQLTEEQRVAGIVAASAGNHAQGVAFACRTMGIKGRIYVPAATPKQKRDRIMVHGGDAVELVVTGANFDEAAAA AREYARVEGATMVEPFDNRDTVIGQGTVAAEILAQLTTLGKTLDTVVVPVGGGGLLSGVVSYLADMAPRTAIVGVEPEGA ASMRAALDAHGPVTLDNVDPFVDGAAVKRIGDLNYHIIEHNQGRIHPISVNEGAVCTEMLDLYQNEGIITEPAGALSVTG LKELSLGSRDVVVCIISGGNNDVLRYGEIMERSLVHRGLKHYFLVNFPQEPGQLRTFLNDILGPDDDITLFEYLKRNNRE TGTALVGLQLGVASELDGLLERMNASRIDCRRLEPGTPEYSYLVNL >Mature_446_residues MLGSSSTPWLKLLPMSKEAENQQVTFGAIHAADIQMAQSRISASIAPTPLQHCPRLSQMTGCEVYLKREDLQDVRSYKIR GAVNAISQLTEEQRVAGIVAASAGNHAQGVAFACRTMGIKGRIYVPAATPKQKRDRIMVHGGDAVELVVTGANFDEAAAA AREYARVEGATMVEPFDNRDTVIGQGTVAAEILAQLTTLGKTLDTVVVPVGGGGLLSGVVSYLADMAPRTAIVGVEPEGA ASMRAALDAHGPVTLDNVDPFVDGAAVKRIGDLNYHIIEHNQGRIHPISVNEGAVCTEMLDLYQNEGIITEPAGALSVTG LKELSLGSRDVVVCIISGGNNDVLRYGEIMERSLVHRGLKHYFLVNFPQEPGQLRTFLNDILGPDDDITLFEYLKRNNRE TGTALVGLQLGVASELDGLLERMNASRIDCRRLEPGTPEYSYLVNL
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=326, Percent_Identity=30.0613496932515, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI19923959, Length=307, Percent_Identity=28.6644951140065, Blast_Score=73, Evalue=6e-13, Organism=Escherichia coli, GI1790207, Length=370, Percent_Identity=39.1891891891892, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI1789505, Length=320, Percent_Identity=34.0625, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789235, Length=356, Percent_Identity=24.7191011235955, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17537387, Length=373, Percent_Identity=31.6353887399464, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71991565, Length=328, Percent_Identity=31.0975609756098, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17508781, Length=287, Percent_Identity=28.2229965156794, Blast_Score=100, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6320930, Length=403, Percent_Identity=34.2431761786601, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322631, Length=320, Percent_Identity=30.9375, Blast_Score=139, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6319788, Length=308, Percent_Identity=25.974025974026, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI21355833, Length=366, Percent_Identity=32.2404371584699, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24645328, Length=253, Percent_Identity=31.6205533596838, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 47912; Mature: 47912
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSSSTPWLKLLPMSKEAENQQVTFGAIHAADIQMAQSRISASIAPTPLQHCPRLSQMT CCCCCCCCEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCHHHCCCHHHCC GCEVYLKREDLQDVRSYKIRGAVNAISQLTEEQRVAGIVAASAGNHAQGVAFACRTMGIK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCC GRIYVPAATPKQKRDRIMVHGGDAVELVVTGANFDEAAAAAREYARVEGATMVEPFDNRD CEEEECCCCCHHHCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCC TVIGQGTVAAEILAQLTTLGKTLDTVVVPVGGGGLLSGVVSYLADMAPRTAIVGVEPEGA CEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCC ASMRAALDAHGPVTLDNVDPFVDGAAVKRIGDLNYHIIEHNQGRIHPISVNEGAVCTEML HHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHH DLYQNEGIITEPAGALSVTGLKELSLGSRDVVVCIISGGNNDVLRYGEIMERSLVHRGLK HHHHCCCCEECCCCCEEECCHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCC HYFLVNFPQEPGQLRTFLNDILGPDDDITLFEYLKRNNRETGTALVGLQLGVASELDGLL EEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH ERMNASRIDCRRLEPGTPEYSYLVNL HHHCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MLGSSSTPWLKLLPMSKEAENQQVTFGAIHAADIQMAQSRISASIAPTPLQHCPRLSQMT CCCCCCCCEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCHHHCCCHHHCC GCEVYLKREDLQDVRSYKIRGAVNAISQLTEEQRVAGIVAASAGNHAQGVAFACRTMGIK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCC GRIYVPAATPKQKRDRIMVHGGDAVELVVTGANFDEAAAAAREYARVEGATMVEPFDNRD CEEEECCCCCHHHCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCC TVIGQGTVAAEILAQLTTLGKTLDTVVVPVGGGGLLSGVVSYLADMAPRTAIVGVEPEGA CEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCC ASMRAALDAHGPVTLDNVDPFVDGAAVKRIGDLNYHIIEHNQGRIHPISVNEGAVCTEML HHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHH DLYQNEGIITEPAGALSVTGLKELSLGSRDVVVCIISGGNNDVLRYGEIMERSLVHRGLK HHHHCCCCEECCCCCEEECCHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCC HYFLVNFPQEPGQLRTFLNDILGPDDDITLFEYLKRNNRETGTALVGLQLGVASELDGLL EEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH ERMNASRIDCRRLEPGTPEYSYLVNL HHHCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1459955; 12948626 [H]