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The map label for this gene is hslR [H]

Identifier: 38234151

GI number: 38234151

Start: 1603691

End: 1604068

Strand: Reverse

Name: hslR [H]

Synonym: DIP1576

Alternate gene names: 38234151

Gene position: 1604068-1603691 (Counterclockwise)

Preceding gene: 38234152

Following gene: 38234145

Centisome position: 64.46

GC content: 56.08

Gene sequence:

>378_bases
ATGGCAGAGGATGCGGCACCTGTGCGTATCGACGTGTGGGTTTGGGCTGTTCGTTTGCTCAAAACACGGTCGTTATCAGC
GCAGGCGTGCAAGGCAGGGCATATCAAACTCAACGGGGTTGCAGTTAAACCCTCGCAGTTGGTTACTCCGGGGGACCGAG
TACGGGTATGGGCTGATCACCGCGAGCGTGATGTAGAGGTTGTTAGCACAGTTCGTAAACGTGTAGGTGCTGCAATTGCC
CAAGCCTGCTACATTGATCATTCTCCGCCACCGCCGCCGAAAGAAATTCTGCTTTCTATGCCACGTCGTGACAAAGGCGC
GGGGCGGCCAACGAAGAAAGAACGCCGAGACATCGATCGGTTGCGTGGTAGGCGCTGA

Upstream 100 bases:

>100_bases
CAACATGGCTTCTCATTAGCCTTGTCATCGCCGTAGTGGGTGGTTGGGTTAATTGGTCTAAGGTTCAAAAAATAGTCAAT
CATAAGGACGTATAGCACCC

Downstream 100 bases:

>100_bases
TTAGTGGGCGTTCATGCGAAACGAAGAAAGTCTTTCACTCCTTAAACCTATAAGGGGTGAAAGACTTTCGTTATTTATGG
GTGAATTAGGATAATCCCCA

Product: putative RNA-binding heat shock protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAEDAAPVRIDVWVWAVRLLKTRSLSAQACKAGHIKLNGVAVKPSQLVTPGDRVRVWADHRERDVEVVSTVRKRVGAAIA
QACYIDHSPPPPPKEILLSMPRRDKGAGRPTKKERRDIDRLRGRR

Sequences:

>Translated_125_residues
MAEDAAPVRIDVWVWAVRLLKTRSLSAQACKAGHIKLNGVAVKPSQLVTPGDRVRVWADHRERDVEVVSTVRKRVGAAIA
QACYIDHSPPPPPKEILLSMPRRDKGAGRPTKKERRDIDRLRGRR
>Mature_124_residues
AEDAAPVRIDVWVWAVRLLKTRSLSAQACKAGHIKLNGVAVKPSQLVTPGDRVRVWADHRERDVEVVSTVRKRVGAAIAQ
ACYIDHSPPPPPKEILLSMPRRDKGAGRPTKKERRDIDRLRGRR

Specific function: May play a important role in binding of nucleic acid. More specific for RNA [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=126, Percent_Identity=32.5396825396825, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 14030; Mature: 13898

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDAAPVRIDVWVWAVRLLKTRSLSAQACKAGHIKLNGVAVKPSQLVTPGDRVRVWADH
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEECCEEECCCCEECCCCEEEEECCC
RERDVEVVSTVRKRVGAAIAQACYIDHSPPPPPKEILLSMPRRDKGAGRPTKKERRDIDR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LRGRR
HCCCC
>Mature Secondary Structure 
AEDAAPVRIDVWVWAVRLLKTRSLSAQACKAGHIKLNGVAVKPSQLVTPGDRVRVWADH
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEECCEEECCCCEECCCCEEEEECCC
RERDVEVVSTVRKRVGAAIAQACYIDHSPPPPPKEILLSMPRRDKGAGRPTKKERRDIDR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LRGRR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]