| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is hisD
Identifier: 38234141
GI number: 38234141
Start: 1592961
End: 1594310
Strand: Reverse
Name: hisD
Synonym: DIP1566
Alternate gene names: 38234141
Gene position: 1594310-1592961 (Counterclockwise)
Preceding gene: 38234145
Following gene: 38234140
Centisome position: 64.06
GC content: 51.93
Gene sequence:
>1350_bases TTGAGGAAACGTAAAATTATGTTGAATGTGATTGATCTTCGCGGACACGTTCCCACCACAAGTGAGCTGCGTAGAACATT GCCACGAGGCGGAACGGATATTAATTCGGTATTACCGATCGTCGAGCCAGTGGTTACCGACGTTAAGAATAGAGGTGCTG CTGCCGCACTTGATTATGGAGAAAAATTCGATCACGTTCGCCCAACATCAATTCGAGTGCCGCAAGATGTCATCGATCAG GCACTGGACAGCTTGGACCCCAATGTCATTGAGGCACTGAAAGAATCGATCGCCCGAGTGCGTGCAGTTCACTCTGAGCA GCTTCCAGCCCAACACACCACTTCCTTTGGTGAAGGCGCAACAATTACAGAGAAGTTCATACCAGTATCTCGCGTTGGCC TCTACGCTCCTGGTGGAAATGCTGTGTATCCCTCCAGCGTTATTATGAACGTTGTCCCCGCTCAAGAAGCGGGAGTGGAA TCATTAGTTGTGGCTTCTCCTCCACAAAAAGATCACGGTGGATGGCCTCACCCCACTATTTTGGCCGCCGCTAAGCTTTT GGGAGTAACTGAGGTTTGGGCTATGGGCGGTGCTCAAGCAGTGGCATTGTTGGCTTATGGCGATGATACCCAGCAAAATA GTGCTGAAGTCTTAGAACCGGTCGATATGATTACTGGCCCTGGCAATATCTTTGTCACCGCTGCCAAGCGTTTGGTGCGC GGGGTGGTGGGCATCGACTCTGAGGCTGGTCCAACAGAAATCGCTATCGTTGCCGACGCGCAGGCGAACCCAGTCTGGAT CGCCTATGATCTCATCAGCCAAGCTGAACATGATGTTCTTGCTGCTTCGGTCCTTATCACGGACTCCGAAGAGTTGGCAC AGCGCGTTAATGAGGAAGTCGCTGCCCGCTACAGTGTCACTCGCAACGCAGATCGCGTATCTGAGGCTCTCAAAGGCCAG CAATCAGGCATCGTGCTTGTCGACGATCTCCCGACCGCCGTTATAGTGGCAGACGCATACGCTGCGGAACACTTGGAAAT TCACACAGCAGAGTCCCACAAGGTGGCAGAACAAATTCGAAACGCTGGTGCAATATTTGTTGGCGGATATTCTCCGGTAC CGCTAGGGGATTACTCAGCGGGTTCGAACCACGTACTGCCAACCTCTGGAAGCGCTCGTTATAGCTCCGGACTTTCTACG CATACCTTCCTCAAGCCAGTCAACGTTATTTACTACGATGAGGTGGCACTGAAAGAAATTTCCGACACCGTGATCACCTT GGCTGATGCCGAGGACCTTCCTGCACACGGCGAAGCAATTCGTACGCGCTTTGAAAATCTTGGCAACTAG
Upstream 100 bases:
>100_bases GACGGGGGTGCTCCATACGCCTTGTTGTGGAGATAGCTGCATATAATGTGTGCTTTAGGCCCATCGTAGGCAGTGTTTTT ACGGAAAACATCGAAAAATA
Downstream 100 bases:
>100_bases GTCTCACTGAAAAAATACGGAAAGAATGCAGTAAACTCATGAAAGATCTAACGCTGAATGATCTTCCTATTCGGGAAGAA CTACGAGGCCAATCCGCTTA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MRKRKIMLNVIDLRGHVPTTSELRRTLPRGGTDINSVLPIVEPVVTDVKNRGAAAALDYGEKFDHVRPTSIRVPQDVIDQ ALDSLDPNVIEALKESIARVRAVHSEQLPAQHTTSFGEGATITEKFIPVSRVGLYAPGGNAVYPSSVIMNVVPAQEAGVE SLVVASPPQKDHGGWPHPTILAAAKLLGVTEVWAMGGAQAVALLAYGDDTQQNSAEVLEPVDMITGPGNIFVTAAKRLVR GVVGIDSEAGPTEIAIVADAQANPVWIAYDLISQAEHDVLAASVLITDSEELAQRVNEEVAARYSVTRNADRVSEALKGQ QSGIVLVDDLPTAVIVADAYAAEHLEIHTAESHKVAEQIRNAGAIFVGGYSPVPLGDYSAGSNHVLPTSGSARYSSGLST HTFLKPVNVIYYDEVALKEISDTVITLADAEDLPAHGEAIRTRFENLGN
Sequences:
>Translated_449_residues MRKRKIMLNVIDLRGHVPTTSELRRTLPRGGTDINSVLPIVEPVVTDVKNRGAAAALDYGEKFDHVRPTSIRVPQDVIDQ ALDSLDPNVIEALKESIARVRAVHSEQLPAQHTTSFGEGATITEKFIPVSRVGLYAPGGNAVYPSSVIMNVVPAQEAGVE SLVVASPPQKDHGGWPHPTILAAAKLLGVTEVWAMGGAQAVALLAYGDDTQQNSAEVLEPVDMITGPGNIFVTAAKRLVR GVVGIDSEAGPTEIAIVADAQANPVWIAYDLISQAEHDVLAASVLITDSEELAQRVNEEVAARYSVTRNADRVSEALKGQ QSGIVLVDDLPTAVIVADAYAAEHLEIHTAESHKVAEQIRNAGAIFVGGYSPVPLGDYSAGSNHVLPTSGSARYSSGLST HTFLKPVNVIYYDEVALKEISDTVITLADAEDLPAHGEAIRTRFENLGN >Mature_449_residues MRKRKIMLNVIDLRGHVPTTSELRRTLPRGGTDINSVLPIVEPVVTDVKNRGAAAALDYGEKFDHVRPTSIRVPQDVIDQ ALDSLDPNVIEALKESIARVRAVHSEQLPAQHTTSFGEGATITEKFIPVSRVGLYAPGGNAVYPSSVIMNVVPAQEAGVE SLVVASPPQKDHGGWPHPTILAAAKLLGVTEVWAMGGAQAVALLAYGDDTQQNSAEVLEPVDMITGPGNIFVTAAKRLVR GVVGIDSEAGPTEIAIVADAQANPVWIAYDLISQAEHDVLAASVLITDSEELAQRVNEEVAARYSVTRNADRVSEALKGQ QSGIVLVDDLPTAVIVADAYAAEHLEIHTAESHKVAEQIRNAGAIFVGGYSPVPLGDYSAGSNHVLPTSGSARYSSGLST HTFLKPVNVIYYDEVALKEISDTVITLADAEDLPAHGEAIRTRFENLGN
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=434, Percent_Identity=34.7926267281106, Blast_Score=224, Evalue=8e-60, Organism=Saccharomyces cerevisiae, GI6319819, Length=450, Percent_Identity=35.1111111111111, Blast_Score=252, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_CORDI (P60858)
Other databases:
- EMBL: BX248358 - RefSeq: NP_939908.1 - ProteinModelPortal: P60858 - SMR: P60858 - GeneID: 2650755 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1566 - NMPDR: fig|257309.1.peg.1499 - HOGENOM: HBG329596 - OMA: LDAHKNA - PhylomeDB: P60858 - ProtClustDB: PRK00877 - BioCyc: CDIP257309:DIP1566-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 47762; Mature: 47762
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 343-343 ACT_SITE 344-344 BINDING 135-135 BINDING 199-199 BINDING 229-229 BINDING 252-252 BINDING 274-274 BINDING 277-277 BINDING 344-344 BINDING 377-377 BINDING 431-431 BINDING 436-436
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRKIMLNVIDLRGHVPTTSELRRTLPRGGTDINSVLPIVEPVVTDVKNRGAAAALDYG CCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC EKFDHVRPTSIRVPQDVIDQALDSLDPNVIEALKESIARVRAVHSEQLPAQHTTSFGEGA HHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC TITEKFIPVSRVGLYAPGGNAVYPSSVIMNVVPAQEAGVESLVVASPPQKDHGGWPHPTI CHHHHCCCHHHCEEECCCCCCCCCHHHHHEECCCHHCCCCEEEEECCCCCCCCCCCCHHH LAAAKLLGVTEVWAMGGAQAVALLAYGDDTQQNSAEVLEPVDMITGPGNIFVTAAKRLVR HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHH GVVGIDSEAGPTEIAIVADAQANPVWIAYDLISQAEHDVLAASVLITDSEELAQRVNEEV HHHCCCCCCCCCEEEEEECCCCCCEEEEHHHHHCCHHHHEEEEEEEECHHHHHHHHHHHH AARYSVTRNADRVSEALKGQQSGIVLVDDLPTAVIVADAYAAEHLEIHTAESHKVAEQIR HHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEEECHHHHCCEEEECCHHHHHHHHHH NAGAIFVGGYSPVPLGDYSAGSNHVLPTSGSARYSSGLSTHTFLKPVNVIYYDEVALKEI CCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHCCCCCHHHHHCCCEEEEECHHHHHHH SDTVITLADAEDLPAHGEAIRTRFENLGN CCCEEEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRKRKIMLNVIDLRGHVPTTSELRRTLPRGGTDINSVLPIVEPVVTDVKNRGAAAALDYG CCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC EKFDHVRPTSIRVPQDVIDQALDSLDPNVIEALKESIARVRAVHSEQLPAQHTTSFGEGA HHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC TITEKFIPVSRVGLYAPGGNAVYPSSVIMNVVPAQEAGVESLVVASPPQKDHGGWPHPTI CHHHHCCCHHHCEEECCCCCCCCCHHHHHEECCCHHCCCCEEEEECCCCCCCCCCCCHHH LAAAKLLGVTEVWAMGGAQAVALLAYGDDTQQNSAEVLEPVDMITGPGNIFVTAAKRLVR HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHH GVVGIDSEAGPTEIAIVADAQANPVWIAYDLISQAEHDVLAASVLITDSEELAQRVNEEV HHHCCCCCCCCCEEEEEECCCCCCEEEEHHHHHCCHHHHEEEEEEEECHHHHHHHHHHHH AARYSVTRNADRVSEALKGQQSGIVLVDDLPTAVIVADAYAAEHLEIHTAESHKVAEQIR HHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEEECHHHHCCEEEECCHHHHHHHHHH NAGAIFVGGYSPVPLGDYSAGSNHVLPTSGSARYSSGLSTHTFLKPVNVIYYDEVALKEI CCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHCCCCCHHHHHCCCEEEEECHHHHHHH SDTVITLADAEDLPAHGEAIRTRFENLGN CCCEEEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14602910