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The map label for this gene is 38234092

Identifier: 38234092

GI number: 38234092

Start: 1537574

End: 1538101

Strand: Reverse

Name: 38234092

Synonym: DIP1513

Alternate gene names: NA

Gene position: 1538101-1537574 (Counterclockwise)

Preceding gene: 38234093

Following gene: 38234091

Centisome position: 61.81

GC content: 47.16

Gene sequence:

>528_bases
ATGGATCCAGCATGCGCATCTGTGGATAACTCCAAAAGTGATCCCTTGACAGACAGTTATCCACAGAAATACAGGTATTC
GTTTCATCGCAATTGCCAACGAATCATGCTTGGCGTCAACCTGAAGAGGAAAAACTCGCACTACACAAAGGGGGCAACGA
TGACAGCTACGCATAATCACTACTTAGCCGTTCTCGGTGAAGATTTCGTCGCACAACAATATGCCAACGAAGGCTATGAC
ATAACGGCACGCAACGTGTCATTTTCGGTGGGGGAAATCGACATTATCGCTACTAGTCCTCAAGGGGAAGTAGTGTTCAT
TGAGGTAAAAACTCGTTCATCTTCTCTCATGGATGCTGCTGAGGCAGTCACACCAACCAAAATGCGGAAAATCCATAGAG
CTGCTTCGAAATGGCTTCAAGGGAAACCATTCGCAGATATCCGTTTCGACGTCGTTGCCGTTCACGTCGATGAATATGGT
GAGCTAGATATGACGCGTTACCAAGGGGTGGAACATGGGGCTTGCTAA

Upstream 100 bases:

>100_bases
ATAAGCCTGATCTCGTAATCCCAGAATAAGACATAACTTTCGTATTAACTTAGAAGCGCGCTTCACGGTAGCCCCCTTAC
CATGAAGCGCGCTTTCGCAT

Downstream 100 bases:

>100_bases
AACTCGATCAGCGGCAATCTCGGGGGTCACAGGCGTTATCGTCGACGTTGAAGCCAATATCGGAGCTGGTTTACCCGGCA
CCTATATCGTGGGACTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDPACASVDNSKSDPLTDSYPQKYRYSFHRNCQRIMLGVNLKRKNSHYTKGATMTATHNHYLAVLGEDFVAQQYANEGYD
ITARNVSFSVGEIDIIATSPQGEVVFIEVKTRSSSLMDAAEAVTPTKMRKIHRAASKWLQGKPFADIRFDVVAVHVDEYG
ELDMTRYQGVEHGAC

Sequences:

>Translated_175_residues
MDPACASVDNSKSDPLTDSYPQKYRYSFHRNCQRIMLGVNLKRKNSHYTKGATMTATHNHYLAVLGEDFVAQQYANEGYD
ITARNVSFSVGEIDIIATSPQGEVVFIEVKTRSSSLMDAAEAVTPTKMRKIHRAASKWLQGKPFADIRFDVVAVHVDEYG
ELDMTRYQGVEHGAC
>Mature_175_residues
MDPACASVDNSKSDPLTDSYPQKYRYSFHRNCQRIMLGVNLKRKNSHYTKGATMTATHNHYLAVLGEDFVAQQYANEGYD
ITARNVSFSVGEIDIIATSPQGEVVFIEVKTRSSSLMDAAEAVTPTKMRKIHRAASKWLQGKPFADIRFDVVAVHVDEYG
ELDMTRYQGVEHGAC

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 19598; Mature: 19598

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPACASVDNSKSDPLTDSYPQKYRYSFHRNCQRIMLGVNLKRKNSHYTKGATMTATHNH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCEECCCCCCCCCCEEEEECCE
YLAVLGEDFVAQQYANEGYDITARNVSFSVGEIDIIATSPQGEVVFIEVKTRSSSLMDAA
EEEEECCHHHHHHHHCCCCEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCHHHHHH
EAVTPTKMRKIHRAASKWLQGKPFADIRFDVVAVHVDEYGELDMTRYQGVEHGAC
HHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MDPACASVDNSKSDPLTDSYPQKYRYSFHRNCQRIMLGVNLKRKNSHYTKGATMTATHNH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCEECCCCCCCCCCEEEEECCE
YLAVLGEDFVAQQYANEGYDITARNVSFSVGEIDIIATSPQGEVVFIEVKTRSSSLMDAA
EEEEECCHHHHHHHHCCCCEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCHHHHHH
EAVTPTKMRKIHRAASKWLQGKPFADIRFDVVAVHVDEYGELDMTRYQGVEHGAC
HHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910 [H]