| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is yhbW [C]
Identifier: 38234017
GI number: 38234017
Start: 1455065
End: 1456183
Strand: Direct
Name: yhbW [C]
Synonym: DIP1436
Alternate gene names: 38234017
Gene position: 1455065-1456183 (Clockwise)
Preceding gene: 38234016
Following gene: 38234018
Centisome position: 58.47
GC content: 49.06
Gene sequence:
>1119_bases ATGCAATTCGGCATTTTCACCATTGGTGACGTTACGACAGACCCCACTACCGGAGTTACTCCCAGCGAACACGATCGCAT TAACGCAATGACACAGATTGCATTAAAGGCTGAAGAAGTAGGTCTTGATGTATTTGCAACCGGTGAGCATCATAATCCAC CATTCGTACCATCCTCCCCTACGACACATTTGGCTTATATTGCAGCGCAGACTAAAAATATTCAGCTATCGACGTCCACC ACCCTGATCACCACTAACGATCCTGTAAAAATCGCCGAAGACTATGCTTTTCTACAGCACCTTTCCGGTGGACGTGTAGA CCTAATGATGGGGCGCGGAAACACCGGCCCCGTTTACCCATGGTTTGGCAAAGATATCCGAAAAGGTATCCCACTCGCTG TCGAGAACTACCATCTTCTTCGTAAGCTATGGCGTGAACCCGTGGTGAATTGGAAAGGTGAATTCCGCACTCCATTACAG AACTACACCTCTACTCCAGCACCGCTAGGCGACGTTCCCCCATTCGTATGGCATGGATCAATTCGGTCTGTACAGATCGC CGAACAAGCAGCATTTTATGGCGATGGATTCTTCCATAACAATATTTTCTGGAATAAAGAGCACACTGCCCAAATGGTCA ATATTTACCGCCAGCGATTTGAAAAGTACGGACACGGTCGCGCAGATCAGGCCATCGTCGGACTCGGTGGGCAAGTATTC ATCGGTGAGACTGAGGCAGAGGCAAAGAAATTCTTCCGTCCTTATTTTGACAACGCACCGGTTTATGGGCACGGACCAAG CCTCGAAGAGTTCACCGAACTTACACCGTTGACCGTTGGCACTGTTGAACAAGTCATCGAACGTACTATGCAGTTCGCTG ATTGGGTTGGTGACTACCAGCGTCAGCTCTTCCTTATCGACCACGCTGGGCTACCTCTTGAAGTTGTTCTTAACCAAATC GAAATCTTAGGCACTCAAGTTGTTCCCGAGCTTCGTCGCCGCATGGAAAAACGTCGGCCTGATCATGTCCCATCTGATCC CCCAAGCCACTCGTTCCTCAAAGCTCACCCAGAGCACCCGCACTTTTTAGTTGAACCAAGTAAAACATCCGCACAATAG
Upstream 100 bases:
>100_bases GTGCCACCTCTGAGAAGAGGGAAGCTCTTGAACATTGTTGATATGTCATATATAATTGCAGGTGTTAGATCACGAATACC CAATTAAAAGGACCAACATC
Downstream 100 bases:
>100_bases GTGTACGAACTACCAGGCTTCCTTGGATAAACGTGAAAGAAGAAGGTAAAAATATATTATGCGTACACTGGCAGTCATTT CCGCAGGTCTTAGCACCCCA
Product: putative oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Luciferase Family Protein; Monooxygenase; Luciferase-Like Subgroup; Luciferase-Like Protein; Luciferase Family Oxidoreductase; Luciferase; Oxidoreductase Protein; Alkanal Monooxygenase; N5 N10-Methylenetetrahydromethanopterin Reductase; Bacterial Luciferase Family Protein; Flavin-Dependent Oxidoreductase; Flavin Monoxygenase; Luciferase-Family Oxidoreductase; Alkanesulfonate Monooxygenase; Oxidoreductase Family Protein; LOW QUALITY PROTEIN Luciferase; Luciferase Protein; Luciferase-Like; Luciferase-Like Monooxygenase Superfamily; Luciferase-Like Monooxygenase Superfamily Protein; Luciferase-Like Oxidoreductase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MQFGIFTIGDVTTDPTTGVTPSEHDRINAMTQIALKAEEVGLDVFATGEHHNPPFVPSSPTTHLAYIAAQTKNIQLSTST TLITTNDPVKIAEDYAFLQHLSGGRVDLMMGRGNTGPVYPWFGKDIRKGIPLAVENYHLLRKLWREPVVNWKGEFRTPLQ NYTSTPAPLGDVPPFVWHGSIRSVQIAEQAAFYGDGFFHNNIFWNKEHTAQMVNIYRQRFEKYGHGRADQAIVGLGGQVF IGETEAEAKKFFRPYFDNAPVYGHGPSLEEFTELTPLTVGTVEQVIERTMQFADWVGDYQRQLFLIDHAGLPLEVVLNQI EILGTQVVPELRRRMEKRRPDHVPSDPPSHSFLKAHPEHPHFLVEPSKTSAQ
Sequences:
>Translated_372_residues MQFGIFTIGDVTTDPTTGVTPSEHDRINAMTQIALKAEEVGLDVFATGEHHNPPFVPSSPTTHLAYIAAQTKNIQLSTST TLITTNDPVKIAEDYAFLQHLSGGRVDLMMGRGNTGPVYPWFGKDIRKGIPLAVENYHLLRKLWREPVVNWKGEFRTPLQ NYTSTPAPLGDVPPFVWHGSIRSVQIAEQAAFYGDGFFHNNIFWNKEHTAQMVNIYRQRFEKYGHGRADQAIVGLGGQVF IGETEAEAKKFFRPYFDNAPVYGHGPSLEEFTELTPLTVGTVEQVIERTMQFADWVGDYQRQLFLIDHAGLPLEVVLNQI EILGTQVVPELRRRMEKRRPDHVPSDPPSHSFLKAHPEHPHFLVEPSKTSAQ >Mature_372_residues MQFGIFTIGDVTTDPTTGVTPSEHDRINAMTQIALKAEEVGLDVFATGEHHNPPFVPSSPTTHLAYIAAQTKNIQLSTST TLITTNDPVKIAEDYAFLQHLSGGRVDLMMGRGNTGPVYPWFGKDIRKGIPLAVENYHLLRKLWREPVVNWKGEFRTPLQ NYTSTPAPLGDVPPFVWHGSIRSVQIAEQAAFYGDGFFHNNIFWNKEHTAQMVNIYRQRFEKYGHGRADQAIVGLGGQVF IGETEAEAKKFFRPYFDNAPVYGHGPSLEEFTELTPLTVGTVEQVIERTMQFADWVGDYQRQLFLIDHAGLPLEVVLNQI EILGTQVVPELRRRMEKRRPDHVPSDPPSHSFLKAHPEHPHFLVEPSKTSAQ
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41906; Mature: 41906
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFGIFTIGDVTTDPTTGVTPSEHDRINAMTQIALKAEEVGLDVFATGEHHNPPFVPSSP CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC TTHLAYIAAQTKNIQLSTSTTLITTNDPVKIAEDYAFLQHLSGGRVDLMMGRGNTGPVYP CCEEEEEEEECCEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC WFGKDIRKGIPLAVENYHLLRKLWREPVVNWKGEFRTPLQNYTSTPAPLGDVPPFVWHGS CCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECC IRSVQIAEQAAFYGDGFFHNNIFWNKEHTAQMVNIYRQRFEKYGHGRADQAIVGLGGQVF CCEEEHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEE IGETEAEAKKFFRPYFDNAPVYGHGPSLEEFTELTPLTVGTVEQVIERTMQFADWVGDYQ EECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH RQLFLIDHAGLPLEVVLNQIEILGTQVVPELRRRMEKRRPDHVPSDPPSHSFLKAHPEHP HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCC HFLVEPSKTSAQ CEEECCCCCCCC >Mature Secondary Structure MQFGIFTIGDVTTDPTTGVTPSEHDRINAMTQIALKAEEVGLDVFATGEHHNPPFVPSSP CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC TTHLAYIAAQTKNIQLSTSTTLITTNDPVKIAEDYAFLQHLSGGRVDLMMGRGNTGPVYP CCEEEEEEEECCEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC WFGKDIRKGIPLAVENYHLLRKLWREPVVNWKGEFRTPLQNYTSTPAPLGDVPPFVWHGS CCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECC IRSVQIAEQAAFYGDGFFHNNIFWNKEHTAQMVNIYRQRFEKYGHGRADQAIVGLGGQVF CCEEEHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEE IGETEAEAKKFFRPYFDNAPVYGHGPSLEEFTELTPLTVGTVEQVIERTMQFADWVGDYQ EECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH RQLFLIDHAGLPLEVVLNQIEILGTQVVPELRRRMEKRRPDHVPSDPPSHSFLKAHPEHP HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCC HFLVEPSKTSAQ CEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA