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The map label for this gene is msrB [H]

Identifier: 38233978

GI number: 38233978

Start: 1411416

End: 1411826

Strand: Direct

Name: msrB [H]

Synonym: DIP1393

Alternate gene names: 38233978

Gene position: 1411416-1411826 (Clockwise)

Preceding gene: 38233977

Following gene: 38233980

Centisome position: 56.71

GC content: 48.18

Gene sequence:

>411_bases
ATGACAAATTTTAAATTGATCACCGACACCGAATGGCGCCAGCGACTCAGCAGCGAAGAGTACCGTGTTTTGCGCGAAGC
AGGTACCGAAGCACCTCACACTGGGGAATACACCAACACCACTACAGAGGGCATCTATTCGTGCCGTGCTTGTGGCACCG
AGCTTTTTCGATCAACAGAAAAGTTCAATTCCCATTGCGGATGGCCTTCTTTCTTCTCGCCATTAGCTGGCGATAAGGTC
ATAGAACGCACAGACACTTCTCATGGTATGGTCCGCACTGAAGTAATCTGCGCAAACTGCGAATCTCATTTAGGGCATGT
CTTTGCAGGTGAAGGTTACGATACCCCCACAGATCTGCGCTATTGCATTAACTCTGTGTGCTTAACTTTGATTCCTGCAG
AAGAAAGCTAA

Upstream 100 bases:

>100_bases
CTATAAAGTAATTCGCGACACATTAGGGAATCCCACGCAATAAATAATTCAGCTCATGAGTTGTAGCCAATACACAATTT
CGACATACTAAGGACAAGCG

Downstream 100 bases:

>100_bases
GGCACTTATCTTTAAACATTTAAAAGCGTGGGGTCAGTAACTCAAATGCTGCTGGTCCCACGCTTTTACCATCTTGCACT
ACGGCAAAACGTTGACAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTNFKLITDTEWRQRLSSEEYRVLREAGTEAPHTGEYTNTTTEGIYSCRACGTELFRSTEKFNSHCGWPSFFSPLAGDKV
IERTDTSHGMVRTEVICANCESHLGHVFAGEGYDTPTDLRYCINSVCLTLIPAEES

Sequences:

>Translated_136_residues
MTNFKLITDTEWRQRLSSEEYRVLREAGTEAPHTGEYTNTTTEGIYSCRACGTELFRSTEKFNSHCGWPSFFSPLAGDKV
IERTDTSHGMVRTEVICANCESHLGHVFAGEGYDTPTDLRYCINSVCLTLIPAEES
>Mature_135_residues
TNFKLITDTEWRQRLSSEEYRVLREAGTEAPHTGEYTNTTTEGIYSCRACGTELFRSTEKFNSHCGWPSFFSPLAGDKVI
ERTDTSHGMVRTEVICANCESHLGHVFAGEGYDTPTDLRYCINSVCLTLIPAEES

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=131, Percent_Identity=43.5114503816794, Blast_Score=115, Evalue=9e-27,
Organism=Homo sapiens, GI301336162, Length=131, Percent_Identity=43.5114503816794, Blast_Score=115, Evalue=9e-27,
Organism=Homo sapiens, GI73089054, Length=131, Percent_Identity=43.5114503816794, Blast_Score=115, Evalue=9e-27,
Organism=Homo sapiens, GI37620216, Length=131, Percent_Identity=43.5114503816794, Blast_Score=115, Evalue=1e-26,
Organism=Homo sapiens, GI117606353, Length=134, Percent_Identity=43.2835820895522, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI1788077, Length=124, Percent_Identity=41.1290322580645, Blast_Score=108, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI115532676, Length=129, Percent_Identity=50.3875968992248, Blast_Score=126, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17553450, Length=129, Percent_Identity=50.3875968992248, Blast_Score=126, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6319816, Length=127, Percent_Identity=39.3700787401575, Blast_Score=109, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24645799, Length=131, Percent_Identity=42.7480916030534, Blast_Score=106, Evalue=4e-24,
Organism=Drosophila melanogaster, GI45553335, Length=131, Percent_Identity=42.7480916030534, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI21356369, Length=131, Percent_Identity=42.7480916030534, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI221378664, Length=126, Percent_Identity=42.8571428571429, Blast_Score=105, Evalue=6e-24,
Organism=Drosophila melanogaster, GI221378662, Length=133, Percent_Identity=40.6015037593985, Blast_Score=103, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24645801, Length=142, Percent_Identity=39.4366197183099, Blast_Score=102, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24645804, Length=142, Percent_Identity=39.4366197183099, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 15283; Mature: 15152

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFKLITDTEWRQRLSSEEYRVLREAGTEAPHTGEYTNTTTEGIYSCRACGTELFRSTE
CCCCEEEECHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KFNSHCGWPSFFSPLAGDKVIERTDTSHGMVRTEVICANCESHLGHVFAGEGYDTPTDLR
HHHCCCCCHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHCHHHHCCEEECCCCCCCHHHHH
YCINSVCLTLIPAEES
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TNFKLITDTEWRQRLSSEEYRVLREAGTEAPHTGEYTNTTTEGIYSCRACGTELFRSTE
CCCEEEECHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KFNSHCGWPSFFSPLAGDKVIERTDTSHGMVRTEVICANCESHLGHVFAGEGYDTPTDLR
HHHCCCCCHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHCHHHHCCEEECCCCCCCHHHHH
YCINSVCLTLIPAEES
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA