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The map label for this gene is ywbN [H]

Identifier: 38233974

GI number: 38233974

Start: 1406797

End: 1408017

Strand: Reverse

Name: ywbN [H]

Synonym: DIP1389

Alternate gene names: 38233974

Gene position: 1408017-1406797 (Counterclockwise)

Preceding gene: 38233975

Following gene: 38233973

Centisome position: 56.58

GC content: 50.29

Gene sequence:

>1221_bases
ATGAGTCGCCGTGGATTTCTTACTGGTACAGCTGGAGTTGCAGCCGCAGGAGCATTAAGTGCGTGCACAGAGCCTGCGCA
TGATGCAGATGCTGTGGGTGTAGATCAAACAGTTGCCCAAGAAATAGAGCCATTCGACGGCATCCATCAATCTGGAATTG
CCACTCCAGCACAATCGCACCTCATAGTGCTGGGACTTAATTGCCGTGCGGGAGTGGATTCTGCTGCAGTGCGACGTTTG
TTGACCCTGTGGACCGAGGATGCTCGGGAGTTAACTCAGGCGCGAAACCCAGTGGGTAGCCTTGAGCCCGAGATGACCTC
GTCACCTTCACGTTTGACAGTTACTGCTGGTGCTGGCGCACGGCTATTCGATATTCTCGGGAAGTCGGAAATGAAGCCTG
CATGGCTGAAAGATATTCCAGTCTTTTCCAAAGACAGACTTGATCCGCGTTGGGGGCAAACGGATCTTGTGCTACAGATT
TGTTCAGATGACCCTATGACCGCAGCTTTCGCCATGCGGCATATGACCCGATCGGGATCTGATTACGCTGAAGTTAAATG
GGTTCAACAGGGATTTTTAAACGCTCGGGGTACTTTGCAAAAAGGCGAAACTCCGCGAAATCTTTTTGGCCAAAAAGATG
GCACAATTAATCCTCACACTGCTGAAGAATTTGATAAGCAGGTTTGGATTGACAATGAAGATGATTCCCCACGTTGGATG
CGCGGTGGAACGTGCATGGTTGTAAGGCGTATTTCAATGAATTTGGACACTTGGGAGCGTCTGGATCGGCAATCCAGAGA
AGTTGCAATTGGGCGCGATATCGTAGAAGGGGCCCCACTAAGCGGTGGGAAGGAGCACGATTCTGCTGACTATGAGGCAG
TTGATGAATATGGTCTTCCGAAGATTGACGCTCGTTCCCACATGGCACTAGCTACGCCACCTTCAGATTTGCCTAATCAG
CGGCTCCTTCGGCGTGCGTATACTTACAATGAAACCCCGATGGTTGGTACTGATCAGCTATCGAATGCTGGCCTTGTGTT
TTGTTGTTTCCAAAAGGATCCGCGTAAACAATTCATTCCGATTCAACAGCGCTTAGACGCTAGCGATCGTTTGAATGAGT
GGATCAAACACATCGGTTCTGCGGTGTACGCGATTTTCCCGGGCACCGATCAAAAGAAAACGGAAGCTTCCATTTGGGGT
GCCGCGTTGTTCGATTCCTAG

Upstream 100 bases:

>100_bases
TAAATAAAATTAAGCCGTCGAATCTCTAGTTGAGGAAAGGTTACTGAAAATGGCCGAAACTCCACGTTTTAGTGTTAAAT
CATTAGGCGAAAATCTTAAG

Downstream 100 bases:

>100_bases
TCAATTCGCGGTACTATAAGCAGCAAAGCGTCGAAAAGTACCGAGTTTAAATGGATCATAAATGTCCTCGGAAGATTTCC
GTGGACATTTACTATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSRRGFLTGTAGVAAAGALSACTEPAHDADAVGVDQTVAQEIEPFDGIHQSGIATPAQSHLIVLGLNCRAGVDSAAVRRL
LTLWTEDARELTQARNPVGSLEPEMTSSPSRLTVTAGAGARLFDILGKSEMKPAWLKDIPVFSKDRLDPRWGQTDLVLQI
CSDDPMTAAFAMRHMTRSGSDYAEVKWVQQGFLNARGTLQKGETPRNLFGQKDGTINPHTAEEFDKQVWIDNEDDSPRWM
RGGTCMVVRRISMNLDTWERLDRQSREVAIGRDIVEGAPLSGGKEHDSADYEAVDEYGLPKIDARSHMALATPPSDLPNQ
RLLRRAYTYNETPMVGTDQLSNAGLVFCCFQKDPRKQFIPIQQRLDASDRLNEWIKHIGSAVYAIFPGTDQKKTEASIWG
AALFDS

Sequences:

>Translated_406_residues
MSRRGFLTGTAGVAAAGALSACTEPAHDADAVGVDQTVAQEIEPFDGIHQSGIATPAQSHLIVLGLNCRAGVDSAAVRRL
LTLWTEDARELTQARNPVGSLEPEMTSSPSRLTVTAGAGARLFDILGKSEMKPAWLKDIPVFSKDRLDPRWGQTDLVLQI
CSDDPMTAAFAMRHMTRSGSDYAEVKWVQQGFLNARGTLQKGETPRNLFGQKDGTINPHTAEEFDKQVWIDNEDDSPRWM
RGGTCMVVRRISMNLDTWERLDRQSREVAIGRDIVEGAPLSGGKEHDSADYEAVDEYGLPKIDARSHMALATPPSDLPNQ
RLLRRAYTYNETPMVGTDQLSNAGLVFCCFQKDPRKQFIPIQQRLDASDRLNEWIKHIGSAVYAIFPGTDQKKTEASIWG
AALFDS
>Mature_405_residues
SRRGFLTGTAGVAAAGALSACTEPAHDADAVGVDQTVAQEIEPFDGIHQSGIATPAQSHLIVLGLNCRAGVDSAAVRRLL
TLWTEDARELTQARNPVGSLEPEMTSSPSRLTVTAGAGARLFDILGKSEMKPAWLKDIPVFSKDRLDPRWGQTDLVLQIC
SDDPMTAAFAMRHMTRSGSDYAEVKWVQQGFLNARGTLQKGETPRNLFGQKDGTINPHTAEEFDKQVWIDNEDDSPRWMR
GGTCMVVRRISMNLDTWERLDRQSREVAIGRDIVEGAPLSGGKEHDSADYEAVDEYGLPKIDARSHMALATPPSDLPNQR
LLRRAYTYNETPMVGTDQLSNAGLVFCCFQKDPRKQFIPIQQRLDASDRLNEWIKHIGSAVYAIFPGTDQKKTEASIWGA
ALFDS

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787255, Length=418, Percent_Identity=31.8181818181818, Blast_Score=188, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314
- InterPro:   IPR006313
- InterPro:   IPR006311
- InterPro:   IPR019546 [H]

Pfam domain/function: PF04261 Dyp_perox; PF10518 TAT_signal [H]

EC number: NA

Molecular weight: Translated: 44716; Mature: 44585

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRGFLTGTAGVAAAGALSACTEPAHDADAVGVDQTVAQEIEPFDGIHQSGIATPAQSH
CCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHCCHHHCCCCCCCCCC
LIVLGLNCRAGVDSAAVRRLLTLWTEDARELTQARNPVGSLEPEMTSSPSRLTVTAGAGA
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC
RLFDILGKSEMKPAWLKDIPVFSKDRLDPRWGQTDLVLQICSDDPMTAAFAMRHMTRSGS
HHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
DYAEVKWVQQGFLNARGTLQKGETPRNLFGQKDGTINPHTAEEFDKQVWIDNEDDSPRWM
CHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCC
RGGTCMVVRRISMNLDTWERLDRQSREVAIGRDIVEGAPLSGGKEHDSADYEAVDEYGLP
CCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
KIDARSHMALATPPSDLPNQRLLRRAYTYNETPMVGTDQLSNAGLVFCCFQKDPRKQFIP
CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCC
IQQRLDASDRLNEWIKHIGSAVYAIFPGTDQKKTEASIWGAALFDS
HHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRRGFLTGTAGVAAAGALSACTEPAHDADAVGVDQTVAQEIEPFDGIHQSGIATPAQSH
CCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHCCHHHCCCCCCCCCC
LIVLGLNCRAGVDSAAVRRLLTLWTEDARELTQARNPVGSLEPEMTSSPSRLTVTAGAGA
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC
RLFDILGKSEMKPAWLKDIPVFSKDRLDPRWGQTDLVLQICSDDPMTAAFAMRHMTRSGS
HHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
DYAEVKWVQQGFLNARGTLQKGETPRNLFGQKDGTINPHTAEEFDKQVWIDNEDDSPRWM
CHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCC
RGGTCMVVRRISMNLDTWERLDRQSREVAIGRDIVEGAPLSGGKEHDSADYEAVDEYGLP
CCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
KIDARSHMALATPPSDLPNQRLLRRAYTYNETPMVGTDQLSNAGLVFCCFQKDPRKQFIP
CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCC
IQQRLDASDRLNEWIKHIGSAVYAIFPGTDQKKTEASIWGAALFDS
HHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]