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The map label for this gene is acnR

Identifier: 38233869

GI number: 38233869

Start: 1293673

End: 1294245

Strand: Direct

Name: acnR

Synonym: DIP1284

Alternate gene names: 38233869

Gene position: 1293673-1294245 (Clockwise)

Preceding gene: 161598674

Following gene: 38233870

Centisome position: 51.98

GC content: 49.91

Gene sequence:

>573_bases
ATGCCCGTTGTGAGCAACACCGAGCTATCGATGCGTCGACAGGAGATACTCGAAGGCGCACGTCGATGCTTCGCCGAACA
TGGTTACGAAGGCGCAACTGTGCGCCGATTAGAAGAAACCGTGGGTAAATCCCGTGGCGCGATTTTTCATCACTTTAGTG
ACAAAGAAAATCTATTCTTGGCACTTGCCCGCGAAGATGCGGCACGGATGGCTGAAGTTGTCGCGGAAAATGGGCTCGTG
GAAGTAATGCGCGATATGCTAGCCCACCCTGAACGCCATGACTGGCTAGCAACTAGGCTTGAAATAACCAAGATGCTGCG
GACAGACCCCAGTTTTCGAAATCGTTGGATAGAACACCAGCGTGTTCTGGACGACGCCGTATTGGAGCGCCTTCAAAGAA
ACGCACATTTGGGACGCATGCGTGACGACGTACCCATTGATGTATTACACACATACTTAGAAACCGTTTTAGATGGTTTT
ATTTCGCGTCTCGCTTCTGGTGGCGATACCGATAACTTAGAACGAGTATTGGATTTGGTTGAAGAATCAGTTCGATCATC
ACAACCCAGCTAG

Upstream 100 bases:

>100_bases
GCTGATTATGTCGTAACCATAGGGGCTCTATCTCAAAAACGAGGTGGAGCCCCTAACCTGATTTATTGTCTCTCTAACGA
GAAGGGGCTACCAACACATT

Downstream 100 bases:

>100_bases
GTCAATATAGACAAAGTAGTCTAGAGTGACATATATGGTTTCAATTTTGCTGGTATCCCCGCGGCCTGGACATGATGTGG
CAACCGCTGAACGTAATGAC

Product: putative TetR-famlily transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPVVSNTELSMRRQEILEGARRCFAEHGYEGATVRRLEETVGKSRGAIFHHFSDKENLFLALAREDAARMAEVVAENGLV
EVMRDMLAHPERHDWLATRLEITKMLRTDPSFRNRWIEHQRVLDDAVLERLQRNAHLGRMRDDVPIDVLHTYLETVLDGF
ISRLASGGDTDNLERVLDLVEESVRSSQPS

Sequences:

>Translated_190_residues
MPVVSNTELSMRRQEILEGARRCFAEHGYEGATVRRLEETVGKSRGAIFHHFSDKENLFLALAREDAARMAEVVAENGLV
EVMRDMLAHPERHDWLATRLEITKMLRTDPSFRNRWIEHQRVLDDAVLERLQRNAHLGRMRDDVPIDVLHTYLETVLDGF
ISRLASGGDTDNLERVLDLVEESVRSSQPS
>Mature_189_residues
PVVSNTELSMRRQEILEGARRCFAEHGYEGATVRRLEETVGKSRGAIFHHFSDKENLFLALAREDAARMAEVVAENGLVE
VMRDMLAHPERHDWLATRLEITKMLRTDPSFRNRWIEHQRVLDDAVLERLQRNAHLGRMRDDVPIDVLHTYLETVLDGFI
SRLASGGDTDNLERVLDLVEESVRSSQPS

Specific function: Represses the aconitase gene acn

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACNR_CORDI (Q6NH62)

Other databases:

- EMBL:   BX248357
- RefSeq:   NP_939636.1
- ProteinModelPortal:   Q6NH62
- GeneID:   2649837
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1284
- NMPDR:   fig|257309.1.peg.1227
- HOGENOM:   HBG429125
- OMA:   GKSRGAI
- ProtClustDB:   CLSK871936
- BioCyc:   CDIP257309:DIP1284-MONOMER
- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647
- Gene3D:   G3DSA:1.10.357.10
- PRINTS:   PR00455

Pfam domain/function: PF00440 TetR_N; SSF46689 Homeodomain_like; SSF48498 TetR_like_C

EC number: NA

Molecular weight: Translated: 21831; Mature: 21700

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS01081 HTH_TETR_1; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVSNTELSMRRQEILEGARRCFAEHGYEGATVRRLEETVGKSRGAIFHHFSDKENLFL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEEH
ALAREDAARMAEVVAENGLVEVMRDMLAHPERHDWLATRLEITKMLRTDPSFRNRWIEHQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RVLDDAVLERLQRNAHLGRMRDDVPIDVLHTYLETVLDGFISRLASGGDTDNLERVLDLV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EESVRSSQPS
HHHHHCCCCC
>Mature Secondary Structure 
PVVSNTELSMRRQEILEGARRCFAEHGYEGATVRRLEETVGKSRGAIFHHFSDKENLFL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEEH
ALAREDAARMAEVVAENGLVEVMRDMLAHPERHDWLATRLEITKMLRTDPSFRNRWIEHQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RVLDDAVLERLQRNAHLGRMRDDVPIDVLHTYLETVLDGFISRLASGGDTDNLERVLDLV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EESVRSSQPS
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910