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The map label for this gene is 38233825

Identifier: 38233825

GI number: 38233825

Start: 1238888

End: 1239652

Strand: Reverse

Name: 38233825

Synonym: DIP1237

Alternate gene names: NA

Gene position: 1239652-1238888 (Counterclockwise)

Preceding gene: 38233826

Following gene: 38233824

Centisome position: 49.81

GC content: 48.89

Gene sequence:

>765_bases
ATGGAAAAAGTAACAGAAACTGTCGTCATTGTAGGAGCTTCAAGCGAAATCGCAGGGAGGATTGCCATCAATCTTGCCTG
CAACCGCGACTTTGTTCTCTTAGCGCGACAATCAGAACGTCTTACCACCCGTGGGGGACTAATGTCGGTGCTCAAAGAGC
TAGGTGCACGTAGCGTCGAGGTCCGAGAATTCAACGCAACAGATTTTACGTCGATAAGGCCGATAATCAGCCAAATTCCA
CGCATTGATCACGCCGTGGTCAGTTTCGGAATCCTCGGTGACCAGAATAAAGCCGAATCAGACGAAGCGCATGCTGCTGA
AATCGCGACGATAGACTACACGTCACAAATTGTTGCGCTTACAGTGCTTGCCGACATCATGAAACGACAAACGCATACAT
CTACGATCACTGTATTTTCATCTATCGCAGGATGGCGGCCTCGACGGGCCAACTACGTATACGGATCGACCAAAGCCGGA
CTCGATGCATTCAGCCAAGGACTTGCCGACTCTCTTCATGGCAGCTCAGTAAAAATGATCATCGCTCGACCAGGTTTCGT
TATCGGACACATGACTCGAGGAATGAAACCTGCTCCTATGTCAGTTACTCCCAACATCGTCGCCGAAGCGATTTGCTCAG
CAATTACTCGATCAACAAAAGAAAAATCTACAAGCACAACTCTATGGATACCGTCGAAGCTAGCGATTCTTGCCACAATA
ATGAAGCTCGTCCCACGCCGAATTTGGCGCAAAATGCCACGCTAA

Upstream 100 bases:

>100_bases
CAGGAAAATACGGCGCCCGAATCGAGGACATAGTCGTCGTTACTGAATCAGGCTGTGAACGTTTAAATAACCAGCCGCGA
ACATTGCAATGAGCTACAAC

Downstream 100 bases:

>100_bases
AACGGGGTAAAGTAGAGAAACTATGAGTATGGAAGCAACCGCGCGCGTTTCTGAATTGGGACGCTCCAAAAACGACGATG
GCCAAGCACACACCGGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MEKVTETVVIVGASSEIAGRIAINLACNRDFVLLARQSERLTTRGGLMSVLKELGARSVEVREFNATDFTSIRPIISQIP
RIDHAVVSFGILGDQNKAESDEAHAAEIATIDYTSQIVALTVLADIMKRQTHTSTITVFSSIAGWRPRRANYVYGSTKAG
LDAFSQGLADSLHGSSVKMIIARPGFVIGHMTRGMKPAPMSVTPNIVAEAICSAITRSTKEKSTSTTLWIPSKLAILATI
MKLVPRRIWRKMPR

Sequences:

>Translated_254_residues
MEKVTETVVIVGASSEIAGRIAINLACNRDFVLLARQSERLTTRGGLMSVLKELGARSVEVREFNATDFTSIRPIISQIP
RIDHAVVSFGILGDQNKAESDEAHAAEIATIDYTSQIVALTVLADIMKRQTHTSTITVFSSIAGWRPRRANYVYGSTKAG
LDAFSQGLADSLHGSSVKMIIARPGFVIGHMTRGMKPAPMSVTPNIVAEAICSAITRSTKEKSTSTTLWIPSKLAILATI
MKLVPRRIWRKMPR
>Mature_254_residues
MEKVTETVVIVGASSEIAGRIAINLACNRDFVLLARQSERLTTRGGLMSVLKELGARSVEVREFNATDFTSIRPIISQIP
RIDHAVVSFGILGDQNKAESDEAHAAEIATIDYTSQIVALTVLADIMKRQTHTSTITVFSSIAGWRPRRANYVYGSTKAG
LDAFSQGLADSLHGSSVKMIIARPGFVIGHMTRGMKPAPMSVTPNIVAEAICSAITRSTKEKSTSTTLWIPSKLAILATI
MKLVPRRIWRKMPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 27680; Mature: 27680

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVTETVVIVGASSEIAGRIAINLACNRDFVLLARQSERLTTRGGLMSVLKELGARSVE
CCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEE
VREFNATDFTSIRPIISQIPRIDHAVVSFGILGDQNKAESDEAHAAEIATIDYTSQIVAL
EEECCCCCCHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCCHHHHEEEEECHHHHHHHH
TVLADIMKRQTHTSTITVFSSIAGWRPRRANYVYGSTKAGLDAFSQGLADSLHGSSVKMI
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEE
IARPGFVIGHMTRGMKPAPMSVTPNIVAEAICSAITRSTKEKSTSTTLWIPSKLAILATI
EECCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
MKLVPRRIWRKMPR
HHHHHHHHHHHCCC
>Mature Secondary Structure
MEKVTETVVIVGASSEIAGRIAINLACNRDFVLLARQSERLTTRGGLMSVLKELGARSVE
CCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEE
VREFNATDFTSIRPIISQIPRIDHAVVSFGILGDQNKAESDEAHAAEIATIDYTSQIVAL
EEECCCCCCHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCCHHHHEEEEECHHHHHHHH
TVLADIMKRQTHTSTITVFSSIAGWRPRRANYVYGSTKAGLDAFSQGLADSLHGSSVKMI
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEE
IARPGFVIGHMTRGMKPAPMSVTPNIVAEAICSAITRSTKEKSTSTTLWIPSKLAILATI
EECCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
MKLVPRRIWRKMPR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]