| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233798
Identifier: 38233798
GI number: 38233798
Start: 1208620
End: 1210032
Strand: Reverse
Name: 38233798
Synonym: DIP1208
Alternate gene names: NA
Gene position: 1210032-1208620 (Counterclockwise)
Preceding gene: 38233799
Following gene: 38233792
Centisome position: 48.62
GC content: 47.77
Gene sequence:
>1413_bases ATGGCTAAGCATTCGGACGGGAAAAACAACTATCGACTTTCGCCCAGTGTGATCGCGATAGCGATCGTCATCGTACTGGT AGCCGCTGGTGTTTTCTTGTGGACCCAGGCAAAACGAGAAGACTCTGCAAAATCCTCCTGTATCAATGGGAACTTAACGC TTCCTATTGCGACCAATAACAAGGAGGTAGCAAGCCAAATTATCGATGCCTACAACTCTTCAGGGCGGGTCACTCGCGAC TACTGTGTTCGTGCTGAACTAACCGATTCTGTCGCTCATGCTGGGGTTTACCTTAGCGACGAAAGTGATCATCAGGTCAA CCAAGTGTTGTCAGCAGAAAAACGGTCACCGGCAACTTTAGAATGGCCGACAGCCGCAACTGACCAAGTGGGGATAGCTC GTCGTGAAGATGCCACAGAAGATGCGCCCGTTACCTACCCGGTGAAGTCCGATGCAGTGTCTTCAGCGCTCGTTGCTGCT TTTACCCACAATAATGATGCTTCTGCTGCGACCAAAATGCTACGTGATTTTAGTGAAACAACAATTGATTCTGCTGTCGC TCAATCAGCGCCAAAGATTGTCGTGTCGAAATCTGAAACTCCGCAAGGATATTCATTTGAAGAAATTCAAAACCTGTCGA AACCGCTACGCGCAGTAGCTCTAAACCCTACCGATTCGGTTAATGAGGAAGTTGTTCGGGCAGGAGCAGACTTTGGTACA GCAATTGCGGCAAACACACCTGATGCTCAAAAACCACAAAAATTGTCACAAGAGGTCGCAACTGCAGCAGAAATTTTGGC TTCACTCACTGATAGTTCACCAGCTGTAGATTCACAATCCAATCAGAGTCCTAGAGATATCCTGATGCTTCTCGATACCT CAGAGTACATCAATGGTGTGAGCACAGATGGAATCCGTTGGTTCGATGCAGCATCACATGGGCTCATTAATCTTGCCCAA AAGCAAGAAGAACGCGGTAAAGCCATAGGACTGTGGAATTATTCTTCCCCACTGACTCCTGGAATTACCCAAGGCTGGCG GTCGAACCTTAATTTCGATACCCTTGACGCTGCTCGCCAAGTCAAAGATGTCCTCGGAAATTTTGGAACTGGCGGGCAAC CACAGACTCTTGCGGCAACATCAGCAGCCTTAAATTATGCTGTAGAGCATGCACAGCATGCTGGAAATACAAGCGTGGTC ATTGTGTTCACAGGAACAAATGACTCATTCACCGGATTAGCTGAATCAGTCAGAAAAGCTCAAGAATCTCACGTTTCACT TCATGCGATTCAAATCGGCGATGGACAAGATGATACGAACATCGCGCAAGCTGCAAAAGACACCAATGGCAGCTACGTGC ACGCAACATCGGCGGCAGAACTAGATAGAGCTATTGCTTCCACAACGAAGTAA
Upstream 100 bases:
>100_bases GGTCAGCTGCTACGTCAACGGCTTGTCGCAGAACTAGACCGAATCGACCGGTTTACACTTACCTCCTAGATCTATTTCCA ATTCCAGAAAGGCGCCAATT
Downstream 100 bases:
>100_bases CCATAATGGATGCGCCCTCGTTTCTATCGGCCAGAGAAAATGATAGAAACGAGGGCGCTTTTGCGTATCAACGCGTTACG ACGTCTTCCGAAGGCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MAKHSDGKNNYRLSPSVIAIAIVIVLVAAGVFLWTQAKREDSAKSSCINGNLTLPIATNNKEVASQIIDAYNSSGRVTRD YCVRAELTDSVAHAGVYLSDESDHQVNQVLSAEKRSPATLEWPTAATDQVGIARREDATEDAPVTYPVKSDAVSSALVAA FTHNNDASAATKMLRDFSETTIDSAVAQSAPKIVVSKSETPQGYSFEEIQNLSKPLRAVALNPTDSVNEEVVRAGADFGT AIAANTPDAQKPQKLSQEVATAAEILASLTDSSPAVDSQSNQSPRDILMLLDTSEYINGVSTDGIRWFDAASHGLINLAQ KQEERGKAIGLWNYSSPLTPGITQGWRSNLNFDTLDAARQVKDVLGNFGTGGQPQTLAATSAALNYAVEHAQHAGNTSVV IVFTGTNDSFTGLAESVRKAQESHVSLHAIQIGDGQDDTNIAQAAKDTNGSYVHATSAAELDRAIASTTK
Sequences:
>Translated_470_residues MAKHSDGKNNYRLSPSVIAIAIVIVLVAAGVFLWTQAKREDSAKSSCINGNLTLPIATNNKEVASQIIDAYNSSGRVTRD YCVRAELTDSVAHAGVYLSDESDHQVNQVLSAEKRSPATLEWPTAATDQVGIARREDATEDAPVTYPVKSDAVSSALVAA FTHNNDASAATKMLRDFSETTIDSAVAQSAPKIVVSKSETPQGYSFEEIQNLSKPLRAVALNPTDSVNEEVVRAGADFGT AIAANTPDAQKPQKLSQEVATAAEILASLTDSSPAVDSQSNQSPRDILMLLDTSEYINGVSTDGIRWFDAASHGLINLAQ KQEERGKAIGLWNYSSPLTPGITQGWRSNLNFDTLDAARQVKDVLGNFGTGGQPQTLAATSAALNYAVEHAQHAGNTSVV IVFTGTNDSFTGLAESVRKAQESHVSLHAIQIGDGQDDTNIAQAAKDTNGSYVHATSAAELDRAIASTTK >Mature_469_residues AKHSDGKNNYRLSPSVIAIAIVIVLVAAGVFLWTQAKREDSAKSSCINGNLTLPIATNNKEVASQIIDAYNSSGRVTRDY CVRAELTDSVAHAGVYLSDESDHQVNQVLSAEKRSPATLEWPTAATDQVGIARREDATEDAPVTYPVKSDAVSSALVAAF THNNDASAATKMLRDFSETTIDSAVAQSAPKIVVSKSETPQGYSFEEIQNLSKPLRAVALNPTDSVNEEVVRAGADFGTA IAANTPDAQKPQKLSQEVATAAEILASLTDSSPAVDSQSNQSPRDILMLLDTSEYINGVSTDGIRWFDAASHGLINLAQK QEERGKAIGLWNYSSPLTPGITQGWRSNLNFDTLDAARQVKDVLGNFGTGGQPQTLAATSAALNYAVEHAQHAGNTSVVI VFTGTNDSFTGLAESVRKAQESHVSLHAIQIGDGQDDTNIAQAAKDTNGSYVHATSAAELDRAIASTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49801; Mature: 49670
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHSDGKNNYRLSPSVIAIAIVIVLVAAGVFLWTQAKREDSAKSSCINGNLTLPIATNN CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC KEVASQIIDAYNSSGRVTRDYCVRAELTDSVAHAGVYLSDESDHQVNQVLSAEKRSPATL HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCEE EWPTAATDQVGIARREDATEDAPVTYPVKSDAVSSALVAAFTHNNDASAATKMLRDFSET ECCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHH TIDSAVAQSAPKIVVSKSETPQGYSFEEIQNLSKPLRAVALNPTDSVNEEVVRAGADFGT HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCC AIAANTPDAQKPQKLSQEVATAAEILASLTDSSPAVDSQSNQSPRDILMLLDTSEYINGV EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHCCC STDGIRWFDAASHGLINLAQKQEERGKAIGLWNYSSPLTPGITQGWRSNLNFDTLDAARQ CCCCEEEEHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHH VKDVLGNFGTGGQPQTLAATSAALNYAVEHAQHAGNTSVVIVFTGTNDSFTGLAESVRKA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH QESHVSLHAIQIGDGQDDTNIAQAAKDTNGSYVHATSAAELDRAIASTTK HHHCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC >Mature Secondary Structure AKHSDGKNNYRLSPSVIAIAIVIVLVAAGVFLWTQAKREDSAKSSCINGNLTLPIATNN CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC KEVASQIIDAYNSSGRVTRDYCVRAELTDSVAHAGVYLSDESDHQVNQVLSAEKRSPATL HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCEE EWPTAATDQVGIARREDATEDAPVTYPVKSDAVSSALVAAFTHNNDASAATKMLRDFSET ECCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHH TIDSAVAQSAPKIVVSKSETPQGYSFEEIQNLSKPLRAVALNPTDSVNEEVVRAGADFGT HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCC AIAANTPDAQKPQKLSQEVATAAEILASLTDSSPAVDSQSNQSPRDILMLLDTSEYINGV EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHCCC STDGIRWFDAASHGLINLAQKQEERGKAIGLWNYSSPLTPGITQGWRSNLNFDTLDAARQ CCCCEEEEHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHH VKDVLGNFGTGGQPQTLAATSAALNYAVEHAQHAGNTSVVIVFTGTNDSFTGLAESVRKA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH QESHVSLHAIQIGDGQDDTNIAQAAKDTNGSYVHATSAAELDRAIASTTK HHHCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA