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The map label for this gene is 38233540

Identifier: 38233540

GI number: 38233540

Start: 915227

End: 916018

Strand: Reverse

Name: 38233540

Synonym: DIP0944

Alternate gene names: NA

Gene position: 916018-915227 (Counterclockwise)

Preceding gene: 38233541

Following gene: 38233538

Centisome position: 36.81

GC content: 53.79

Gene sequence:

>792_bases
GTGCAGAACAAGACAGAACATAAACGCCACAGCCAGGCACACACCACCTATGCCAACGACCAATTCTTTGGCATCTCTTT
GTGGTCCTCTCTTGTTCTCATGACAGCCGCGATGGTCACCGGGCTGCTGATTTCTCAAGCAACAGGCAGCGTCGGCTGGC
CTTTTCTCACGATCTTTGTCGCATTCTCGCTGTTTACGGCACTCCTTACCCTTCCCAGTGGTCTATTCCTACTCGTGGCA
AGCCTGCCGCTGTTTTTCGGCGTAGGAATTCTTGCCACAGCATGGCTCATTGTAAAAAGCTCAGCAGCTGAAGGCGCGCC
TTTTAGCACAACGCAGCTTATTACTACTATTTATCCCATTACAGAGCATTTCCCCCTCCTAGCGGCAACGACCATCGGTG
CGGGACTGATTGCTTATCTTCGTGTGTCGCTTCTCAAACGCAAATACAAGCGCGTTACCACTATCGCGGAGCGCACTCGA
CGTGCTCAAAGCGAGACTGATCGTCGGAATTACACGGCCGCGTCGAAGGCTCGCACACAAGCGCAACGATCTAGCAAACC
GCAGCGCACTCGGGCCAGCAGCCGATCTCGCCGCGATAACAGTGTGACTGTTGAAGAGCTGATGCGGCGTAGGCAAGAAC
AGCAACAAACCGGTGCCAAGTCGTTTGCGCCAAGGCCTACACGTACTGCAGCTCAGCGTGAGGCCGCCGAGCGGGACTTG
ACTCGTCGCCTAGTAAATCCAGATCCCGAAATTCATAGAACTCGCACTTTCGACGACGACTTATACAGTTAA

Upstream 100 bases:

>100_bases
CAGCGACCTAACACATCTGTTCCACAAACCCTGATTTTTAGGACACACCCCCTAGGCCAAAGTTCCCAACCACAGATCCC
CTTGAGTAGGATAAACATCC

Downstream 100 bases:

>100_bases
AGTCGAAAGTTAGAACGCACAAGGCGCCACGCATATCCCATGCGTGGCGCCTTCTGCTTCGCTCTATGTGCGCGCAGGGC
GCAAATCTCTAGGAAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQNKTEHKRHSQAHTTYANDQFFGISLWSSLVLMTAAMVTGLLISQATGSVGWPFLTIFVAFSLFTALLTLPSGLFLLVA
SLPLFFGVGILATAWLIVKSSAAEGAPFSTTQLITTIYPITEHFPLLAATTIGAGLIAYLRVSLLKRKYKRVTTIAERTR
RAQSETDRRNYTAASKARTQAQRSSKPQRTRASSRSRRDNSVTVEELMRRRQEQQQTGAKSFAPRPTRTAAQREAAERDL
TRRLVNPDPEIHRTRTFDDDLYS

Sequences:

>Translated_263_residues
MQNKTEHKRHSQAHTTYANDQFFGISLWSSLVLMTAAMVTGLLISQATGSVGWPFLTIFVAFSLFTALLTLPSGLFLLVA
SLPLFFGVGILATAWLIVKSSAAEGAPFSTTQLITTIYPITEHFPLLAATTIGAGLIAYLRVSLLKRKYKRVTTIAERTR
RAQSETDRRNYTAASKARTQAQRSSKPQRTRASSRSRRDNSVTVEELMRRRQEQQQTGAKSFAPRPTRTAAQREAAERDL
TRRLVNPDPEIHRTRTFDDDLYS
>Mature_263_residues
MQNKTEHKRHSQAHTTYANDQFFGISLWSSLVLMTAAMVTGLLISQATGSVGWPFLTIFVAFSLFTALLTLPSGLFLLVA
SLPLFFGVGILATAWLIVKSSAAEGAPFSTTQLITTIYPITEHFPLLAATTIGAGLIAYLRVSLLKRKYKRVTTIAERTR
RAQSETDRRNYTAASKARTQAQRSSKPQRTRASSRSRRDNSVTVEELMRRRQEQQQTGAKSFAPRPTRTAAQREAAERDL
TRRLVNPDPEIHRTRTFDDDLYS

Specific function: Unknown

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29437; Mature: 29437

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKTEHKRHSQAHTTYANDQFFGISLWSSLVLMTAAMVTGLLISQATGSVGWPFLTIFV
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AFSLFTALLTLPSGLFLLVASLPLFFGVGILATAWLIVKSSAAEGAPFSTTQLITTIYPI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TEHFPLLAATTIGAGLIAYLRVSLLKRKYKRVTTIAERTRRAQSETDRRNYTAASKARTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRSSKPQRTRASSRSRRDNSVTVEELMRRRQEQQQTGAKSFAPRPTRTAAQREAAERDL
HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH
TRRLVNPDPEIHRTRTFDDDLYS
HHHHCCCCCCHHHCCCCCHHCCC
>Mature Secondary Structure
MQNKTEHKRHSQAHTTYANDQFFGISLWSSLVLMTAAMVTGLLISQATGSVGWPFLTIFV
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AFSLFTALLTLPSGLFLLVASLPLFFGVGILATAWLIVKSSAAEGAPFSTTQLITTIYPI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TEHFPLLAATTIGAGLIAYLRVSLLKRKYKRVTTIAERTRRAQSETDRRNYTAASKARTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRSSKPQRTRASSRSRRDNSVTVEELMRRRQEQQQTGAKSFAPRPTRTAAQREAAERDL
HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH
TRRLVNPDPEIHRTRTFDDDLYS
HHHHCCCCCCHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA