Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680923
Identifier: 37680923
GI number: 37680923
Start: 2783486
End: 2785207
Strand: Direct
Name: 37680923
Synonym: VV2739
Alternate gene names: NA
Gene position: 2783486-2785207 (Clockwise)
Preceding gene: 37680922
Following gene: 37680924
Centisome position: 82.98
GC content: 47.62
Gene sequence:
>1722_bases ATGCTGCTACTCACCAATCACCTAGGCTACGAACTGAGTGGACCCAAACATGCGGTCATTCAAAGTAATAAGTCGCGTTT GTCGTCTTATGCTGCCTTATTGGTGTGCGCCAATGGCCATCAGACCGTGGCATCATTAGAAATCGAGAAAGTGGGCAAAG TCGCCAATTGGCACCAAGGTTACTTTTACACGATTGATTTTTCAGACTTCGACCAAGTCGGCGAGTTCTATATTCGTTTT GATAATCATCGTTCAGCAAACTTCACTATCGGCCAATCGCTGCTGATGCAGCAAACTTTTTCCGATGTACTGCATTACTT TAAATCACAGCGCTGTGGCGGCATTTTTGACCTGCAAGATCGCAACGCACCACTGTTAAACAGTAATAAAACCGTCGATG TACACGGCGGTTGGTACGACGCATCTGGCGACGTGAGCAAATACCTCAGCCATCTTTCGTATGCCAATTATCTCAACCCA CAGCAAACGCCGATGGTGGTTTGGAACATGCTTAAAGGGCTAGAACTGCTCTCTGGTCATGAGATCCTACCCGCCTTCAG CCAAGTACGTTTGAAAGAAGAAGCGCTGCATGGCGCGGATTTCCTCGTCAGAATGCAAGACAGCCAAGGCTTCTTCTATA CCACGGTGTTCGATAAGTGGAGTAAAGACATCAAACAACGCGAGATCTGCTCTTACGAAACTCAGCAAGGTCATAAATCT GATGACTATCAAGCAGGTTTTCGTCAAGGTGGCGGTGTCAGCATCGCAGCGCTAGCGGCCGCCTCTCGTCTCAATGTGCA CGGTGAATTTGACCAACAGAAATACCTCAATGCTGCAGAGAATGGTTACTGGCATCTCAAAGAGTACAACCCTCAATACC TCAACGATGGTCAAGAAAACATCATTGATGAGTATTGCGCTCTGCTCGCGGTTGTTGAGCTCTATCGTGCCACTCAAGAA GAGCGTTATCTCGCGGAAAGCCGAATTTGGGCATCACGCTTGTGTGCTCGACAGCAAAGTGACGAGCAGTTTGCCCATTA TTGGTCTGCCGATCTGGATGGTTCTCGTCCCTACTTCCACGCAGCGGAAGCAGGCTTGCCTGTTATTGCCCTGTGCGAAT ACCTCTCGATTGAACACAACTCTGATCTACTGAAACAAACACGAGAAGTCGTTCGCCAAGCATGTGAATTTGAGCTCAAC ATTACTCATAAAGTGAATAACCCATTTAGCTACCCAAGACAATATGTCAAAGGCGTAAACGAAAATAAGCGTGATGCGTT TTTTATCGCGCAAAACAATGAGTCTGGTTACTGGTGGCAAGGTGAAAATGCGCGTTTAGGCTCCATCGCCTCAATGGCTT ACTTGGTGCAACCTCATCTGCAAGATGCTCACCTGAGTCATGAGATGGCCGTATTAGGTCAGCGCTCACTCGATTGGGTA TTGGGTCTCAACCCTTACGATATGTGCATGCTGGATGGGCATGGCCGTAACAATCCTGACTATTTGCCTCAATTCGGTTT CTTCAACGCCAAAGGGGGGGTCTGTAACGGCATCACCTCAGGCTTTGATGATGAAAACGACATTGCCTTTAATCCTGACA AACAAAAAGACGACTTATTACAAAACTGGCGCTGGGGAGAACAATGGATCCCTCATGGGGCTTGGTATCTTCTCGCGATC ATGAGCCAGACACACTACAACTCAGCCACGCTAGGAAAATAA
Upstream 100 bases:
>100_bases TCGTTGTTACCTATTCGAAAACTAAACCTAATTGAGCCAAGGCGTTGCCTTGGCTCTCACTGTTACTACCTATTATTTTG CGACATGTCGGAGATTTGTA
Downstream 100 bases:
>100_bases CATGACGCATTTATACGTAGGAATCGATGGGGGCGGCACTTCTTGCCGAGCACGCATCAAAGATGCTCAAGGGCACTTTA TTGGTGAAGCCAAAAGCGGC
Product: endoglucanase-related protein
Products: NA
Alternate protein names: Endoglucanase-Related Protein; Endoglucanase-Like Protein; Chitobiase; Glycoside Hydrolase Family Protein; Endoglucanase; Glucosamine-Link Cellobiase; Beta-Glycosidase-Like Protein; Glycosy Hydrolase Family Protein
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQGYFYTIDFSDFDQVGEFYIRF DNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQDRNAPLLNSNKTVDVHGGWYDASGDVSKYLSHLSYANYLNP QQTPMVVWNMLKGLELLSGHEILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS DDYQAGFRQGGGVSIAALAAASRLNVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQENIIDEYCALLAVVELYRATQE ERYLAESRIWASRLCARQQSDEQFAHYWSADLDGSRPYFHAAEAGLPVIALCEYLSIEHNSDLLKQTREVVRQACEFELN ITHKVNNPFSYPRQYVKGVNENKRDAFFIAQNNESGYWWQGENARLGSIASMAYLVQPHLQDAHLSHEMAVLGQRSLDWV LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPDKQKDDLLQNWRWGEQWIPHGAWYLLAI MSQTHYNSATLGK
Sequences:
>Translated_573_residues MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQGYFYTIDFSDFDQVGEFYIRF DNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQDRNAPLLNSNKTVDVHGGWYDASGDVSKYLSHLSYANYLNP QQTPMVVWNMLKGLELLSGHEILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS DDYQAGFRQGGGVSIAALAAASRLNVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQENIIDEYCALLAVVELYRATQE ERYLAESRIWASRLCARQQSDEQFAHYWSADLDGSRPYFHAAEAGLPVIALCEYLSIEHNSDLLKQTREVVRQACEFELN ITHKVNNPFSYPRQYVKGVNENKRDAFFIAQNNESGYWWQGENARLGSIASMAYLVQPHLQDAHLSHEMAVLGQRSLDWV LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPDKQKDDLLQNWRWGEQWIPHGAWYLLAI MSQTHYNSATLGK >Mature_573_residues MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQGYFYTIDFSDFDQVGEFYIRF DNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQDRNAPLLNSNKTVDVHGGWYDASGDVSKYLSHLSYANYLNP QQTPMVVWNMLKGLELLSGHEILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS DDYQAGFRQGGGVSIAALAAASRLNVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQENIIDEYCALLAVVELYRATQE ERYLAESRIWASRLCARQQSDEQFAHYWSADLDGSRPYFHAAEAGLPVIALCEYLSIEHNSDLLKQTREVVRQACEFELN ITHKVNNPFSYPRQYVKGVNENKRDAFFIAQNNESGYWWQGENARLGSIASMAYLVQPHLQDAHLSHEMAVLGQRSLDWV LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPDKQKDDLLQNWRWGEQWIPHGAWYLLAI MSQTHYNSATLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65390; Mature: 65390
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQG CEEEECCCCEECCCCCEEECCCCHHHHHHHEEEEEECCCCCEEHHEEHHHHHCCCCCCCC YFYTIDFSDFDQVGEFYIRFDNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQD EEEEEECCCHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC RNAPLLNSNKTVDVHGGWYDASGDVSKYLSHLSYANYLNPQQTPMVVWNMLKGLELLSGH CCCCCCCCCCEEEECCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC EILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS CHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHCCCCCC DDYQAGFRQGGGVSIAALAAASRLNVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQEN CCHHHHHCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHCCCHHH IIDEYCALLAVVELYRATQEERYLAESRIWASRLCARQQSDEQFAHYWSADLDGSRPYFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEE AAEAGLPVIALCEYLSIEHNSDLLKQTREVVRQACEFELNITHKVNNPFSYPRQYVKGVN HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHCCC ENKRDAFFIAQNNESGYWWQGENARLGSIASMAYLVQPHLQDAHLSHEMAVLGQRSLDWV CCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPDKQKDDLL ECCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QNWRWGEQWIPHGAWYLLAIMSQTHYNSATLGK HCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQG CEEEECCCCEECCCCCEEECCCCHHHHHHHEEEEEECCCCCEEHHEEHHHHHCCCCCCCC YFYTIDFSDFDQVGEFYIRFDNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQD EEEEEECCCHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC RNAPLLNSNKTVDVHGGWYDASGDVSKYLSHLSYANYLNPQQTPMVVWNMLKGLELLSGH CCCCCCCCCCEEEECCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC EILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS CHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHCCCCCC DDYQAGFRQGGGVSIAALAAASRLNVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQEN CCHHHHHCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHCCCHHH IIDEYCALLAVVELYRATQEERYLAESRIWASRLCARQQSDEQFAHYWSADLDGSRPYFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEE AAEAGLPVIALCEYLSIEHNSDLLKQTREVVRQACEFELNITHKVNNPFSYPRQYVKGVN HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHCCC ENKRDAFFIAQNNESGYWWQGENARLGSIASMAYLVQPHLQDAHLSHEMAVLGQRSLDWV CCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPDKQKDDLL ECCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QNWRWGEQWIPHGAWYLLAIMSQTHYNSATLGK HCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA