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The map label for this gene is yhbV [H]

Identifier: 37680876

GI number: 37680876

Start: 2731623

End: 2732528

Strand: Direct

Name: yhbV [H]

Synonym: VV2692

Alternate gene names: 37680876

Gene position: 2731623-2732528 (Clockwise)

Preceding gene: 37680875

Following gene: 37680879

Centisome position: 81.43

GC content: 48.45

Gene sequence:

>906_bases
ATGGCAATAAGGATTCAAGGAAACAAGATGAAATACTCACTCGGTCCGCTACTTTACTTCTGGCCCAAACAGAACGTTGA
AGACTTTTACCATCAAGCGAAAAACAGCTCTGCCGACATCATCTATTTGGGGGAATCGGTCTGCTCCAAACGCCGTGAAA
TGAAACCCGCACACTGGTTTGAGTTGGCGAAAGAGCTTTCCAGTGCAGGCAAGCAAGTGGTGCTTTCTACCATGGCACTG
CTCGAAGCCCCAAGCGAAGTCAACGTGATGAAAAAGTACATCGAAAATGGTGACTTTGCCATTGAAGCGAACGACGTATC
GGCTATTCAGTTGGCGTTTGAAAAGCGTGTTCCCTTTGTTGTAGGCCCAGCAGTCAACACATACAATGCGCACACGCTTA
AATTGTTCCTTAAGCAAGGGATGATTCGTTGGTGCATGCCTGTCGAGCTGTCTCGTGAATGGCTGCAAAACGTATTAACC
CAATGCGATGAAGTGGGCATTCGCAACCAATTTGAAGTAGAAGTCTTTAGCCATGGCTATTTGCCGCTCGCCTATTCCGC
ACGCTGTTTTACCGCCCGTGCAGAAAACAAAGCCAAAGACGATTGTGAAACCTGCTGCATCAAATACCCAACGGGCATTC
AAGTGCACAGCCAAGAAGGCCAAGCGGTATTCAATCTCAATGGCATCCAGACGCAATCTGGTTACTGCTACAACCTGATT
AACGATCTCCCTGCCATGCAAGGATTGGTGGATGTGGTGCGTGTCAGCCCATTAGGGTTAGAGACATTTACGACCGTCGA
TCAATTTCGCGCCAACGAACAAGGCGCACAGCCGCGTCAAATCGAAGACCGTCAATGCAATGGCTACTGGCACCAAATTG
CAGGCCTAGAGGTGAAAAATCTCTAG

Upstream 100 bases:

>100_bases
AAGCGAATCCACAAGCCTATCAAGTGGAAGAGGCTTGGAATGCCGCATTGGCGAATGTCTCCGAAGGGACACAAACCACG
CTCGGTGCTTATCATCGTCA

Downstream 100 bases:

>100_bases
CTTTATCCCGTTAAAACAACAAAGAGGGCTTGCACCCTCTTTGTTATCTTACCGTTCTATTTTCCTACTCTTCGATGTTC
TTCCATATACCTACGCTTCA

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MAIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWFELAKELSSAGKQVVLSTMAL
LEAPSEVNVMKKYIENGDFAIEANDVSAIQLAFEKRVPFVVGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLT
QCDEVGIRNQFEVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLI
NDLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKNL

Sequences:

>Translated_301_residues
MAIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWFELAKELSSAGKQVVLSTMAL
LEAPSEVNVMKKYIENGDFAIEANDVSAIQLAFEKRVPFVVGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLT
QCDEVGIRNQFEVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLI
NDLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKNL
>Mature_300_residues
AIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWFELAKELSSAGKQVVLSTMALL
EAPSEVNVMKKYIENGDFAIEANDVSAIQLAFEKRVPFVVGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLTQ
CDEVGIRNQFEVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLIN
DLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKNL

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=291, Percent_Identity=63.9175257731959, Blast_Score=410, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 34104; Mature: 33973

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWF
CEEEEECCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHCCHHHHH
ELAKELSSAGKQVVLSTMALLEAPSEVNVMKKYIENGDFAIEANDVSAIQLAFEKRVPFV
HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHCCCEE
VGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLTQCDEVGIRNQFEVEVFSHGY
ECCCCCCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
LPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLI
EEEEECCEEEEECCCCCCCCCHHHEEEECCCCCEEECCCCCEEEEECCEECCCCCHHHHH
NDLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKN
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEECC
L
C
>Mature Secondary Structure 
AIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWF
EEEEECCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHCCHHHHH
ELAKELSSAGKQVVLSTMALLEAPSEVNVMKKYIENGDFAIEANDVSAIQLAFEKRVPFV
HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHCCCEE
VGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLTQCDEVGIRNQFEVEVFSHGY
ECCCCCCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
LPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLI
EEEEECCEEEEECCCCCCCCCHHHEEEECCCCCEEECCCCCEEEEECCEECCCCCHHHHH
NDLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKN
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEECC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]