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The map label for this gene is chiD [H]

Identifier: 37680762

GI number: 37680762

Start: 2604228

End: 2606780

Strand: Direct

Name: chiD [H]

Synonym: VV2578

Alternate gene names: 37680762

Gene position: 2604228-2606780 (Clockwise)

Preceding gene: 37680760

Following gene: 37680764

Centisome position: 77.63

GC content: 51.35

Gene sequence:

>2553_bases
ATGGAGAGAAAAATGAGAGTCACTTTGTTATCAAGCGCGCTGATCAGTGCGCTTGGCGTCAGCTATCAAGCGCAGGCTTA
TAACTGCCAAAGCCTAGCGACATGGAATAGCAGCGAGATTTACACATCCGGTAGTCAAGTTCAAAAAGAGAACCAAGCAT
TCGAAGCCGCCTACTGGACGCAAGGCAATGATCCCGTCACGAACTCTGGTCCCTGGGAGGCATGGAAATCTCTTGGCCAA
TGTGACCACGGCGGAGGTAATCTACCACCAAGCATCACCTTCTCTTCTCCAACCAATAATGCAGAAATTCCTGAAGGCGC
AGTCATCACGTTGTTGGCGAATGCCAGCGATGAGGATGGCCAAGTTAGCCAAGTCGAGTTTCTTGCAGGAACACAATTGA
TTGCGGTGGTCACACAAGCACCATTTGAAACCCCATGGACAGCGGTGAAAGGTACCTCTCAATTAACGGCCATTGCCACG
GACAATGAAGGGGCAACCCAGTCCACCAACGTTAATATCAGCGTGTTACCCCAAGGAGAGCTTGCGCCACCAACGGTTTC
TCTGACCAGCCCAACCGGAAGTGAAACACTGAGCGATAAAGACAGCTTAATCGTGAGCGCTCAAGCGGCAGACAGCGATG
GCATCGTGACGCAAGTGGAGTTCTTCATCGATAATCAATCGGTCTTTGTGGATACCAACGCGCCTTACGAGTACCTCTGG
AATGCGGTTGCGGGCACCCATACATTCAAAGCACAAGCGACCGATGATGCCAATTTAACCACCATGAGCCAAAACGTCTC
ATTGGTTGTCAGTGGCAGCCATTCTGGCGGCTGCGCGGATGCAGTTCCTTATCTTGCTGGCACACGCTACGAAGCGGGTA
CGTTGGTCTCCAATCTCAATCAGAAATACCGTTGCGATGTCGCAGGCTGGTGTTCTTCTGATGCCGCTTGGGCTTACGAG
CCTGGGGTAGGCCAATACTGGCAAGATGCTTGGAGTGGATTGGGCGCGTGCTCAACCCCACCGCAAATTACCATTACCTC
CCCCAATGACGGTGCGGTGGTGCTCGCAGGCAGTAGCCTAACCCTCAGCGCCGATGCCAGTGACGCAGACGGCAGCGTCA
CCCAAGTCGAGTTTTTCGCGAATAATTCGAGCTTAGGTGTGGTGACTCAGCCTCCCTACGCACAGACTTGGAGTGCAACT
TTCGTTGGAGCCAATCAGCTAAAAGCGATCGCGACCGACAACGACAATAACGTAAGTGAGTCGGTGGTCAATGTTACGGT
CAGTGATCAAGCGCTTGTCGTCACGCTCACTTCACCAACGGCCGGCCAAACGGTTGGTTTGGGTAAAAACGTGACCCTAA
GTGCCGACGCGACCTCCCTCACTTCCGCGATTAAGCAAGTCGACTTTGTCGTCAACGGCAGTGTGATTGCAACCGACAAT
AGCGCTCCGTACTCTGTCTCTTGGACACCTGCGGCGATCGGTAACTTTAGCGTCAGTGCTCAAGCGGTCGATTTAGCGGG
TAATCAAGCGCTCTCGGAAGCGGCGGCAATCAAGGTGGTTGAGCAGTCGGAAAAACGCCACAAACTGATTGGCTACTGGC
ACAACTTTGTGAATGGGGCTGGCTGTCCGATACGTCTCGCTGACATGTCAAACGCATGGGATGTGATTGATATTGCCTTT
GCAGAAAACGATCGCAACAGCAATGGCACGGTCCACTTCAACCTTTACTCAGGGGATATTTACAGCAGTTGTGCGCCGCT
TGATCCGCTCCAGTTCAAACAAGATATGGCGGCACTGCAGGCGCAAGGTAAAAAGTTTGTACTTTCCCTTGGCGGAGCAG
AAGGCACCATTACTCTGAATACCGATCAAGATGAAGCGAATTTTGTTTCTAGCTTAACCGAACTGATCAAAGAATGGGGA
TTTGATGGACTCGATGTGGATCTTGAAAGTGGCTCAAACCTTGTTCACGGTTCGCAAATTCAGGCGCGATTGGGCAGGGC
CCTACTGCAAATTGAACAAAATATCGGTGGTGACATGTACCTCACCATGGCACCAGAACATCCTTACGTTCAAGGCGGTA
TGGTGGCCTACAGCGGAATTTGGGGAGCCTACATTCCGGTCATTAATGCTACTCGCAGCACACTCGACTTACTTCATGTT
CAGCTCTACAACAATGGTGGATTACCCAACCCTTACCTACCGGGCGCCGCTCCTGAAGGCTCTGTCGATATGATGGTTGC
GCAATCTAAGATGTTGATTGAAGGGTTTGAACTCGCCGATGGTACTCGTTTTGAGCCGCTTCGCGACGACCAGGTCGCCA
TTGGCCTTCCTTCAGGGCCAAGCTCAGCTAACTCTGGCCAAGCGCCGACTCAAAATATCCTAGATGCACTCGATTGTTTA
ACATTAGGCACAAAATGTTCCACGGTGAAACCGGCGTTCAACTACCCGAATTTTGGTGGCGTGATGACTTGGTCAATCAA
TTGGGATAAGCATGATGGTTTCAATTTCTCCAAACCTGTGGGAGATAAATTAACGCAAATGAATGCCCGCTAA

Upstream 100 bases:

>100_bases
CTGTACGTGATATCGAGGGAGTAAATATCATTTAATCAGCAATTTAGCCTGCAAAACTCTCTAACTTGGCTACTTATTAC
TCTTGAGATGTTTTTTATTA

Downstream 100 bases:

>100_bases
ACACAAGCGTCTGTAAAACCAGAGAGCACCGCTAAGGGTGCTCTCTTTGTTGCAAAATTAGATGGTAAATACCTGATAGT
TTTTCAACTCTGGAATCTTC

Product: chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 850; Mature: 850

Protein sequence:

>850_residues
MERKMRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGNDPVTNSGPWEAWKSLGQ
CDHGGGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIAT
DNEGATQSTNVNISVLPQGELAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLW
NAVAGTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYRCDVAGWCSSDAAWAYE
PGVGQYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSAT
FVGANQLKAIATDNDNNVSESVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADATSLTSAIKQVDFVVNGSVIATDN
SAPYSVSWTPAAIGNFSVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPIRLADMSNAWDVIDIAF
AENDRNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELIKEWG
FDGLDVDLESGSNLVHGSQIQARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHV
QLYNNGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSANSGQAPTQNILDALDCL
TLGTKCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKLTQMNAR

Sequences:

>Translated_850_residues
MERKMRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGNDPVTNSGPWEAWKSLGQ
CDHGGGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIAT
DNEGATQSTNVNISVLPQGELAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLW
NAVAGTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYRCDVAGWCSSDAAWAYE
PGVGQYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSAT
FVGANQLKAIATDNDNNVSESVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADATSLTSAIKQVDFVVNGSVIATDN
SAPYSVSWTPAAIGNFSVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPIRLADMSNAWDVIDIAF
AENDRNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELIKEWG
FDGLDVDLESGSNLVHGSQIQARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHV
QLYNNGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSANSGQAPTQNILDALDCL
TLGTKCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKLTQMNAR
>Mature_850_residues
MERKMRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGNDPVTNSGPWEAWKSLGQ
CDHGGGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIAT
DNEGATQSTNVNISVLPQGELAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLW
NAVAGTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYRCDVAGWCSSDAAWAYE
PGVGQYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSAT
FVGANQLKAIATDNDNNVSESVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADATSLTSAIKQVDFVVNGSVIATDN
SAPYSVSWTPAAIGNFSVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPIRLADMSNAWDVIDIAF
AENDRNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELIKEWG
FDGLDVDLESGSNLVHGSQIQARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHV
QLYNNGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSANSGQAPTQNILDALDCL
TLGTKCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKLTQMNAR

Specific function: Unknown

COG id: COG3979

COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 89746; Mature: 89746

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKMRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWT
CCCEEEEHHHHHHHHHHHCCCEEECCCCCCEEECCCCCEEEECCHHHHHHCCCEEEEEEE
QGNDPVTNSGPWEAWKSLGQCDHGGGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDG
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCC
QVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIATDNEGATQSTNVNISVLPQGE
CEEEEEEECCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCC
LAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLW
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHHH
NAVAGTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLN
HHHCCCEEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHCC
QKYRCDVAGWCSSDAAWAYEPGVGQYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSL
CEEEECCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCEE
TLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSATFVGANQLKAIATDNDNNVSE
EEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCC
SVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADATSLTSAIKQVDFVVNGSVIATDN
EEEEEEECCCEEEEEEECCCCCCEECCCCCEEEECCHHHHHHHHHHEEEEECCEEEEECC
SAPYSVSWTPAAIGNFSVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGA
CCCEEEEECCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
GCPIRLADMSNAWDVIDIAFAENDRNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQ
CCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHH
AQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELIKEWGFDGLDVDLESGSNLVHGSQI
HCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHH
QARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHV
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCHHHEEEEEE
QLYNNGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGP
EEECCCCCCCCCCCCCCCCCCEEEEEECCHHEEEEEECCCCCCCCCCCCCCEEEECCCCC
SSANSGQAPTQNILDALDCLTLGTKCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
GDKLTQMNAR
CHHHHHCCCC
>Mature Secondary Structure
MERKMRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWT
CCCEEEEHHHHHHHHHHHCCCEEECCCCCCEEECCCCCEEEECCHHHHHHCCCEEEEEEE
QGNDPVTNSGPWEAWKSLGQCDHGGGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDG
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCC
QVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIATDNEGATQSTNVNISVLPQGE
CEEEEEEECCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCC
LAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLW
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHHH
NAVAGTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLN
HHHCCCEEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHCC
QKYRCDVAGWCSSDAAWAYEPGVGQYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSL
CEEEECCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCEE
TLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSATFVGANQLKAIATDNDNNVSE
EEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCC
SVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADATSLTSAIKQVDFVVNGSVIATDN
EEEEEEECCCEEEEEEECCCCCCEECCCCCEEEECCHHHHHHHHHHEEEEECCEEEEECC
SAPYSVSWTPAAIGNFSVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGA
CCCEEEEECCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
GCPIRLADMSNAWDVIDIAFAENDRNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQ
CCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHH
AQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELIKEWGFDGLDVDLESGSNLVHGSQI
HCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHH
QARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHV
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCHHHEEEEEE
QLYNNGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGP
EEECCCCCCCCCCCCCCCCCCEEEEEECCHHEEEEEECCCCCCCCCCCCCCEEEECCCCC
SSANSGQAPTQNILDALDCLTLGTKCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
GDKLTQMNAR
CHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]