Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680709
Identifier: 37680709
GI number: 37680709
Start: 2554607
End: 2555287
Strand: Direct
Name: 37680709
Synonym: VV2525
Alternate gene names: NA
Gene position: 2554607-2555287 (Clockwise)
Preceding gene: 37680708
Following gene: 37680714
Centisome position: 76.15
GC content: 42.29
Gene sequence:
>681_bases ATGAGTCATTTTTCTGATTATTATGTGGTATACCAACGAGTGGGCGAGCACGCTATGGTTTTGACTGGTCATGAGAAAAA TGCGGGAGCTGATCTTACTTTTAATCAGTTTCAAGAAAACACCAACCGCTGGTTCTACTTTGAAAATGGCTTTAGGGATG AAGACGTAAGTCAAGGGATACACCATCAGTTGTGTAACTTACATATGTCCGGCAGAAAAATGATGGTAAAACGCGAGCTG TATCTGGCACTGCGTCATATCGAAATCGCCGGAGCGCAATGGCTGAAAGCCGTTATCATCAATGACGATGACACTTACCA CGATGACTATCACTACTTAAACTTCTACGAAAATCCGGTTGATGAGGATTACGCATACTACGATTTTGTTGATTTCGATA AGAGCGAATACAAAGCAAAGAAATATGCTGATTACCTGCCCCCACTCTACACCTTCAAAAAAGTCGTTTTATCACCAGAA AAGCTCGCAGCCGTGCCCTTGGAAAAACGCTTAATTTGGAACGACATACACACCACGAACTGCCTTGCTGTGCATAAATC CGTCAAAGAAATCATGGAAAAATACCAACCTCTTGATTGCCGCTTTACCCGAATTGAAGAGTATCAAGAAAATATGGGTA CTCGCGCAGAATACGACGCCGATGGGAATCTGATATGTTAA
Upstream 100 bases:
>100_bases TGGAAAAATACCAACCTCTTGATTGCCGCTTTACCCGAATTGAAGAGTATCAAGAAAATATGGGTACTCGCGCAGAATAC GACGCCGATGGGAATCTAAT
Downstream 100 bases:
>100_bases AAAGCCATTGCTCAATAATATGCCTGTCGAAAAGACACACTGAATAGCAATGGCTTCAGTCAACCTTGGTCTTACAAAAA TCAAATAACACTATTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSHFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRKMMVKREL YLALRHIEIAGAQWLKAVIINDDDTYHDDYHYLNFYENPVDEDYAYYDFVDFDKSEYKAKKYADYLPPLYTFKKVVLSPE KLAAVPLEKRLIWNDIHTTNCLAVHKSVKEIMEKYQPLDCRFTRIEEYQENMGTRAEYDADGNLIC
Sequences:
>Translated_226_residues MSHFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRKMMVKREL YLALRHIEIAGAQWLKAVIINDDDTYHDDYHYLNFYENPVDEDYAYYDFVDFDKSEYKAKKYADYLPPLYTFKKVVLSPE KLAAVPLEKRLIWNDIHTTNCLAVHKSVKEIMEKYQPLDCRFTRIEEYQENMGTRAEYDADGNLIC >Mature_225_residues SHFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRKMMVKRELY LALRHIEIAGAQWLKAVIINDDDTYHDDYHYLNFYENPVDEDYAYYDFVDFDKSEYKAKKYADYLPPLYTFKKVVLSPEK LAAVPLEKRLIWNDIHTTNCLAVHKSVKEIMEKYQPLDCRFTRIEEYQENMGTRAEYDADGNLIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26877; Mature: 26746
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGI CCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHH HHQLCNLHMSGRKMMVKRELYLALRHIEIAGAQWLKAVIINDDDTYHDDYHYLNFYENPV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCC DEDYAYYDFVDFDKSEYKAKKYADYLPPLYTFKKVVLSPEKLAAVPLEKRLIWNDIHTTN CCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCCCH CLAVHKSVKEIMEKYQPLDCRFTRIEEYQENMGTRAEYDADGNLIC HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCEECCCCCCCC >Mature Secondary Structure SHFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGI CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHH HHQLCNLHMSGRKMMVKRELYLALRHIEIAGAQWLKAVIINDDDTYHDDYHYLNFYENPV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCC DEDYAYYDFVDFDKSEYKAKKYADYLPPLYTFKKVVLSPEKLAAVPLEKRLIWNDIHTTN CCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCCCH CLAVHKSVKEIMEKYQPLDCRFTRIEEYQENMGTRAEYDADGNLIC HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA