Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680705
Identifier: 37680705
GI number: 37680705
Start: 2551911
End: 2552588
Strand: Direct
Name: 37680705
Synonym: VV2521
Alternate gene names: NA
Gene position: 2551911-2552588 (Clockwise)
Preceding gene: 37680703
Following gene: 37680706
Centisome position: 76.07
GC content: 44.84
Gene sequence:
>678_bases ATGAGTCATTTTTCTGATTATTATGTGGTTTACCAGCGTGTAGGCGAGCACGCCATGGTGTTAGTCGGGCATGAAAATGA TGTTCCACGAGACCTGACGGGTAATGACTTCCAGGAAGACACAAACCGCTGGTTTTACTTTGAAAATGGCTTTAGGGAGG AAGATGTCAGTCAAGGGATACACCACCAGTTGTGTAACTTACATATGTCCGGCAGAAACATGATGGTAAAACGCGAGCTG TATCTGGCACTGCGCCATATCGAAATCACCGGAGCACAATGGCTGAGAGCCGTTATCATCAATGACGATGACACTTACCA CGATGATTACCACTACTTAAACTTCTATGAAAACCCGGTCGATGAGGATTACGTCTATTACGATTTTGTAGACTTTGACC AGAGCGAGTACGAAAAAGATGTCTTTGCCGACTACCTGCCCCCGCTCTACACCTTCGAGAAAATCGTCTTATCACAAGAA AAACTCGCTGCCGTACCCCTGGAAAAACGCTTAATTTGGGATGACTTGCAGTTTACGGATTGCCTAGTCGTACATAAATC CGTTAAAGAAATCATGGAAAAATACCAACCTCTCGACTGTCGATTTACCCGAATTGAAGAGTATCAAGAAGATATGGGCA CTCGCGCAGAATACGACGCCGATGGGAATCTGATATGA
Upstream 100 bases:
>100_bases GCACGTACAACTGACGCATGAGCAACCAACCATTTCCTAAAGGTAGTCTTGTACACCGAAAACCAAAGCCACTAACAGAT ATCACAGCAAGGAATCTAAT
Downstream 100 bases:
>100_bases GTAAGTTTTCTGATTATTATGTGGTGTACCAGCGTGTGGGCGAGCACGCTATGGTTTTGACTGGTCATGAGAAAAATGCG GGAGCTGATCTTACTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSHFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFREEDVSQGIHHQLCNLHMSGRNMMVKREL YLALRHIEITGAQWLRAVIINDDDTYHDDYHYLNFYENPVDEDYVYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSQE KLAAVPLEKRLIWDDLQFTDCLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLI
Sequences:
>Translated_225_residues MSHFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFREEDVSQGIHHQLCNLHMSGRNMMVKREL YLALRHIEITGAQWLRAVIINDDDTYHDDYHYLNFYENPVDEDYVYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSQE KLAAVPLEKRLIWDDLQFTDCLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLI >Mature_224_residues SHFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFREEDVSQGIHHQLCNLHMSGRNMMVKRELY LALRHIEITGAQWLRAVIINDDDTYHDDYHYLNFYENPVDEDYVYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSQEK LAAVPLEKRLIWDDLQFTDCLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27010; Mature: 26879
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFREEDVSQGI CCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH HHQLCNLHMSGRNMMVKRELYLALRHIEITGAQWLRAVIINDDDTYHDDYHYLNFYENPV HHHHHHEEECCCCEEHHHHHHHHHHHEEEECHHEEEEEEECCCCCCCCCEEEEEEECCCC DEDYVYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSQEKLAAVPLEKRLIWDDLQFTD CCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHCCHHHHHHHCCCCHHH CLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLI HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SHFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFREEDVSQGI CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH HHQLCNLHMSGRNMMVKRELYLALRHIEITGAQWLRAVIINDDDTYHDDYHYLNFYENPV HHHHHHEEECCCCEEHHHHHHHHHHHEEEECHHEEEEEEECCCCCCCCCEEEEEEECCCC DEDYVYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSQEKLAAVPLEKRLIWDDLQFTD CCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHCCHHHHHHHCCCCHHH CLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLI HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA