Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680685
Identifier: 37680685
GI number: 37680685
Start: 2532845
End: 2533546
Strand: Direct
Name: 37680685
Synonym: VV2501
Alternate gene names: NA
Gene position: 2532845-2533546 (Clockwise)
Preceding gene: 37680684
Following gene: 37680686
Centisome position: 75.51
GC content: 48.43
Gene sequence:
>702_bases ATGAACACCATTGAGCAGCTGACTGGCAGCGAAACGTCTCATTTAGAACACGTTTTAGTGGGGGAGAAATGGTTTTGGCT CCACCCTGAGGTGAAAAATGATCTTTTCGCTCTGCTAGAAGCGGCTCAAACCGCTGGTTTTAAAATGGAAATTGCCAGCG GTTTTCGTGATTTTCAACGCCAAAAGGCCATTTGGAATGGTAAGTTTTCCGCTGCAACTCCGATCCTCGATCATCATTCG CAGCCCATGGATAAAAGCTCGCTCAGTGACAGCGAAAAAATGTGGGCCATCCTCCGTTGGTCCGCTTTGCCTGGCGCCAG CCGCCATCACTGGGGGTGCGATTTTGATGTCTTTGCGCGCAATCTACTGCCCGAAAACGAATCGCTCAAATTGGAACCTT GGGAATATCTCTCTGGACACCAGCAAGCGTTCCATATCTGGCTAAAAGGGAACTTGTCCCGCTTTGGGTTTTTCTTTCCC TATGCGGAAGACTTAGGAGGCGTGGCTGCAGAGCCTTGGCATATCAGCCATCTAGCAACATCTCAGCAATGCCTAACCCT GCTAACACCAGAGAAACTCCGCCAACAATTGGAACTTCATCCCATTGACGGGCAGGAACAAGTGCTCTCTAATCTTACTC TGATCTACAATCAATTTATCGCCAACATTTGTACACCGGAGGCTGTATGCAAGAAATCTTAA
Upstream 100 bases:
>100_bases CGGTGAACGCCACCATCCATAAAGTGAACGAGTGCGTGAAGATCGATGACTTAGAAAAGCTCACCGATATGTACCAGAAA ACATTGGAAAACTTATTGGC
Downstream 100 bases:
>100_bases CCAATCCTTGGGTCATCAGCTTTGTGGTACTCAGTGTCATCGTTGGTAACATCGCGGCACTAAAATACACCGCCAAAATG AAAATAGGCCAAGTGGATAA
Product: D-alanyl-D-alanine carboxypeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNTIEQLTGSETSHLEHVLVGEKWFWLHPEVKNDLFALLEAAQTAGFKMEIASGFRDFQRQKAIWNGKFSAATPILDHHS QPMDKSSLSDSEKMWAILRWSALPGASRHHWGCDFDVFARNLLPENESLKLEPWEYLSGHQQAFHIWLKGNLSRFGFFFP YAEDLGGVAAEPWHISHLATSQQCLTLLTPEKLRQQLELHPIDGQEQVLSNLTLIYNQFIANICTPEAVCKKS
Sequences:
>Translated_233_residues MNTIEQLTGSETSHLEHVLVGEKWFWLHPEVKNDLFALLEAAQTAGFKMEIASGFRDFQRQKAIWNGKFSAATPILDHHS QPMDKSSLSDSEKMWAILRWSALPGASRHHWGCDFDVFARNLLPENESLKLEPWEYLSGHQQAFHIWLKGNLSRFGFFFP YAEDLGGVAAEPWHISHLATSQQCLTLLTPEKLRQQLELHPIDGQEQVLSNLTLIYNQFIANICTPEAVCKKS >Mature_233_residues MNTIEQLTGSETSHLEHVLVGEKWFWLHPEVKNDLFALLEAAQTAGFKMEIASGFRDFQRQKAIWNGKFSAATPILDHHS QPMDKSSLSDSEKMWAILRWSALPGASRHHWGCDFDVFARNLLPENESLKLEPWEYLSGHQQAFHIWLKGNLSRFGFFFP YAEDLGGVAAEPWHISHLATSQQCLTLLTPEKLRQQLELHPIDGQEQVLSNLTLIYNQFIANICTPEAVCKKS
Specific function: Unknown
COG id: COG1876
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003709 [H]
Pfam domain/function: PF02557 VanY [H]
EC number: NA
Molecular weight: Translated: 26598; Mature: 26598
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIEQLTGSETSHLEHVLVGEKWFWLHPEVKNDLFALLEAAQTAGFKMEIASGFRDFQR CCCHHHHCCCCHHHHHHHEECCEEEEECCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH QKAIWNGKFSAATPILDHHSQPMDKSSLSDSEKMWAILRWSALPGASRHHWGCDFDVFAR HHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHEEHEEECCCCCCCCCCCCCCHHHHHH NLLPENESLKLEPWEYLSGHQQAFHIWLKGNLSRFGFFFPYAEDLGGVAAEPWHISHLAT HHCCCCCCCEECCHHHHCCCCEEEEEEEECCCCHHEEECCCHHHHCCCCCCCEEHHHHHH SQQCLTLLTPEKLRQQLELHPIDGQEQVLSNLTLIYNQFIANICTPEAVCKKS HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MNTIEQLTGSETSHLEHVLVGEKWFWLHPEVKNDLFALLEAAQTAGFKMEIASGFRDFQR CCCHHHHCCCCHHHHHHHEECCEEEEECCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH QKAIWNGKFSAATPILDHHSQPMDKSSLSDSEKMWAILRWSALPGASRHHWGCDFDVFAR HHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHEEHEEECCCCCCCCCCCCCCHHHHHH NLLPENESLKLEPWEYLSGHQQAFHIWLKGNLSRFGFFFPYAEDLGGVAAEPWHISHLAT HHCCCCCCCEECCHHHHCCCCEEEEEEEECCCCHHEEECCCHHHHCCCCCCCEEHHHHHH SQQCLTLLTPEKLRQQLELHPIDGQEQVLSNLTLIYNQFIANICTPEAVCKKS HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]