Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
---|---|
Accession | NC_005139 |
Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is gloA [H]
Identifier: 37680584
GI number: 37680584
Start: 2432378
End: 2432773
Strand: Direct
Name: gloA [H]
Synonym: VV2400
Alternate gene names: 37680584
Gene position: 2432378-2432773 (Clockwise)
Preceding gene: 37680583
Following gene: 37680585
Centisome position: 72.51
GC content: 47.98
Gene sequence:
>396_bases ATGACCAAAATGATTCACAGCATGATCCGTGTCAGCGATCTCGACAGATCGATCGCTTTCTACCGTGATGCACTAGAACT CGAGATCAAAGACCAATTTGTTTTCGATACTTTCACTCTGACTTACCTCGCCAACAAAACCACCGGCTTCGAGCTTGAGT TGACTTACAATCACGGCATGAGTGATCCCTACACACATGGGACAGGCTACGGCCACCTTGCAGTGTGCATCGAAGACATC GAACTCGCTCATAAACGCCTACGCGATTTAGGGATAGCACCCAGTGATGTGAAAGCGATGGATCACAACCAAAAACACCT TGCGACCTTCTTCTTTATCACCGACCCAGACGGATACAAAATCGAGTTTTTGCAGCGCCAAGGCCGCTACCAATAA
Upstream 100 bases:
>100_bases GCCAAGAGCTCGTAAATAGACAAATTTAAATGTAATACTCACGTACTACCAAAGGTTGGTTTCTCAACATTATTCTGTCG CCTCGCAATGAGGAACCACC
Downstream 100 bases:
>100_bases GCATCACTCGAATACGATTTTCGGCTTGAGTTTAGGGTTAGACATTATTTAAAAAACTCATTAAGGGGCCGTCATTGTTA GCAATGACCTGGTCTCCTGT
Product: lactoylglutathione lyase
Products: NA
Alternate protein names: Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase [H]
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTKMIHSMIRVSDLDRSIAFYRDALELEIKDQFVFDTFTLTYLANKTTGFELELTYNHGMSDPYTHGTGYGHLAVCIEDI ELAHKRLRDLGIAPSDVKAMDHNQKHLATFFFITDPDGYKIEFLQRQGRYQ
Sequences:
>Translated_131_residues MTKMIHSMIRVSDLDRSIAFYRDALELEIKDQFVFDTFTLTYLANKTTGFELELTYNHGMSDPYTHGTGYGHLAVCIEDI ELAHKRLRDLGIAPSDVKAMDHNQKHLATFFFITDPDGYKIEFLQRQGRYQ >Mature_130_residues TKMIHSMIRVSDLDRSIAFYRDALELEIKDQFVFDTFTLTYLANKTTGFELELTYNHGMSDPYTHGTGYGHLAVCIEDIE LAHKRLRDLGIAPSDVKAMDHNQKHLATFFFITDPDGYKIEFLQRQGRYQ
Specific function: Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione [H]
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glyoxalase I family [H]
Homologues:
Organism=Escherichia coli, GI1787940, Length=130, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR004361 - InterPro: IPR018146 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =4.4.1.5 [H]
Molecular weight: Translated: 15212; Mature: 15081
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKMIHSMIRVSDLDRSIAFYRDALELEIKDQFVFDTFTLTYLANKTTGFELELTYNHGM CHHHHHHHHHHHHCHHHHHHHHHHEEEEECCEEEEHHEEEEEEECCCCCEEEEEEECCCC SDPYTHGTGYGHLAVCIEDIELAHKRLRDLGIAPSDVKAMDHNQKHLATFFFITDPDGYK CCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEECCCCCE IEFLQRQGRYQ EEEEECCCCCC >Mature Secondary Structure TKMIHSMIRVSDLDRSIAFYRDALELEIKDQFVFDTFTLTYLANKTTGFELELTYNHGM HHHHHHHHHHHHCHHHHHHHHHHEEEEECCEEEEHHEEEEEEECCCCCEEEEEEECCCC SDPYTHGTGYGHLAVCIEDIELAHKRLRDLGIAPSDVKAMDHNQKHLATFFFITDPDGYK CCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEECCCCCE IEFLQRQGRYQ EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 9719565 [H]